Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01543 ATGGATCCTTCCTTTACTTCAAAATCCCTTCTGCATGTTGTTCTTATCTTAGGCTTTCTTGGTACCACCAGATTGCATGCAAGTGACACTCCTCTGACACTGGATTACTATGCATCAACTTGCCCCACTGTGTTTGATATTGTCAGGAAGGAAATGGAATGTGCAGTTCTTTCTGATCCCCGCAATGCAGCAAAGATAGTCCGGCTACATTTCCATGACTGCTTTGTTCAGGGATGCGATGGATCCATTTTGCTTGATGATACAGTCACACTTAAAGGTGAGAAAAAGGCAGCTAACAACATCAACTCTTTGAAAGGCTCGGCAATCGTTGATAGAATAAAAAACATGGTTGAATCAGAGTGCCCTGCAGTTGTTTCTTGCGCTGATATTCTCACAATTGCAGCCAGAGATGCTGTGATTCTGGTAGGGGGGCCATACTGGGATGTTCCTGTGGGAAGGAAAGATTCTGTCACTGCAAATTTTGATCTTGCCAACACCAATCTTCCCACACCAGAGGAGAGCCTTCTCTCTATCATTGCCAAGTTTCTTTACCAAGGTCTATCTGTGACTGATATGGTAGCCCTTGCAGGAGCCCACACCATTGGCATGGCACAGTGTAAGAATTTCAGGTCAAGAATTTATGGAAGCTTTGACTCAACATTGAAAAATCCAATTTCTGAGAGTCACCGCAGCAACCTGAGATCTGTTTGCCCACCTGTTGGGGGAGGAGACAACAACATAACTGCAATGGACTATATGACACCTAATCTGTTTGATAATTCTTTCTACCAGTTACTGCTAAATGGGGAGGGAGTTCTCAACTCAGACCAAGAAATGTACTCAAGTTTGTTTGGTATTGAAACTAGAGAGCTTGTGAAGATGTATGCAGCAGATCCTCTGGCTTTCTTCCAACAGTTCTCAGAGTCAATGGTGAAAATGGGAAATATAACAAACTCGGAAAGCTTCATCACTGGGGAAGTTAGGAAGAACTGCAGATTTGTCAACACATAG 1011 0.4332 MDPSFTSKSLLHVVLILGFLGTTRLHASDTPLTLDYYASTCPTVFDIVRKEMECAVLSDPRNAAKIVRLHFHDCFVQGCDGSILLDDTVTLKGEKKAANNINSLKGSAIVDRIKNMVESECPAVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTANFDLANTNLPTPEESLLSIIAKFLYQGLSVTDMVALAGAHTIGMAQCKNFRSRIYGSFDSTLKNPISESHRSNLRSVCPPVGGGDNNITAMDYMTPNLFDNSFYQLLLNGEGVLNSDQEMYSSLFGIETRELVKMYAADPLAFFQQFSESMVKMGNITNSESFITGEVRKNCRFVNT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01543 336 Gene3D Peroxidase, domain 2 169 313 - -
Vian10g01543 336 FunFam Peroxidase 35 176 - -
Vian10g01543 336 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 Pfam Peroxidase 48 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Vian10g01543 336 CDD secretory_peroxidase 32 334 IPR033905 GO:0004601|GO:0042744
Vian10g01543 336 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Vian10g01543 336 Gene3D - 36 335 - -
Vian10g01543 336 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 PANTHER PEROXIDASE 72-RELATED 31 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 ProSiteProfiles Plant heme peroxidase family profile. 31 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 SUPERFAMILY Heme-dependent peroxidases 32 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian10g01543 336 FunFam Peroxidase 169 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01543 Vian-Chr10 26225615 26227831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01543 10 336 Peroxidase AT1G68850 71.125 3.06e-176 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01543 K00430 - gmx:100780750 607.06