Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01532 ATGTTTTTCTCTGTGTCCATTTGTTCTTCTGCGGCATTGTCTTTGCCACTCAGATGCAATGCCAAAATCTCTTCTCCACGGGTTGATGTTGCTGCCGATGCCTTCCCTTCCTTTCTCCCCAGAGAAATGCACACCATTCAAGACCCTTCTGCCAGAAAATTCGCCATGCGGATTCAGAGGCTACCTGTGCCTGTAAATATTTCATCTTTTTACTTTCTTCAGTTCCCTGCCTCTTCCTTTGATATTCTGCGTACTGTTTTTGCATCTTTCTTGTGTAAAGTTAAAAGGGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCAATGGTGCAGAGCAAGGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTCTTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATCTAGAAAAACTTCCTCCCTGTAATGTGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAAATACTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCTGTCAATTATCCTGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAACTGGCAACCTTACCCAGATCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCTTTCCATTACGCCTTTATGCCACCTATTTGACCTTCACAAACATTTCCTTCAGCGCTAGCCTTGATTGGACTAATGTTGGCCGGTTGCATTGTTTATTACCTTGGTGGAATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTTCTCCTTTGATAGGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCGGTGCAACTCCACTGTGAATTACCTGATGCAACAATTCGCCAAATACCCCATTGTGGTCATCTTCCGCATCTCGAAAGACCAGACTCTACCATCAAATTAATTGTTGAATTTGTGCAGAGAGAAGCTAAGCAATTGAATCCATATGCTGCACAAGTATCAAGATTGAACTGA 1140 0.4246 MFFSVSICSSAALSLPLRCNAKISSPRVDVAADAFPSFLPREMHTIQDPSARKFAMRIQRLPVPVNISSFYFLQFPASSFDILRTVFASFLCKVKRVRFSENPIMSSCVKPMVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCNVVSKRDHFYQFWKYYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRSVAYAGVNLLKSFPLRLYATYLTFTNISFSASLDWTNVGRLHCLLPWWNDATVDFMTSGGYNVSPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDATIRQIPHCGHLPHLERPDSTIKLIVEFVQREAKQLNPYAAQVSRLN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01532 379 PANTHER HYDROLASE 17 364 - -
Vian10g01532 379 PRINTS Epoxide hydrolase signature 338 360 IPR000639 GO:0003824
Vian10g01532 379 PRINTS Epoxide hydrolase signature 124 142 IPR000639 GO:0003824
Vian10g01532 379 PRINTS Epoxide hydrolase signature 203 216 IPR000639 GO:0003824
Vian10g01532 379 PRINTS Epoxide hydrolase signature 144 159 IPR000639 GO:0003824
Vian10g01532 379 PRINTS Alpha/beta hydrolase fold signature 203 216 IPR000073 -
Vian10g01532 379 PRINTS Alpha/beta hydrolase fold signature 189 202 IPR000073 -
Vian10g01532 379 PRINTS Alpha/beta hydrolase fold signature 144 159 IPR000073 -
Vian10g01532 379 PRINTS Alpha/beta hydrolase fold signature 307 321 IPR000073 -
Vian10g01532 379 Gene3D alpha/beta hydrolase 109 369 IPR029058 -
Vian10g01532 379 Pfam Alpha/beta hydrolase family 120 353 IPR000073 -
Vian10g01532 379 SUPERFAMILY alpha/beta-Hydrolases 118 363 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01532 Vian-Chr10 26078477 26084277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01532 119 361 Acyl Lipid Metabolism Gene Families AT3G10840 23.567 7.36e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01532 - - gmx:100792060 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01532 10 26078477 26084277 Vian10g01532 10 26078477 26084277 ECH