Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01523 ATGGATGAAACACAAGATCAGTATTATTCTTCCAGTCTACCTGAGATTTCTTTGTCTCGTGATGGTAGTGTGAGGTCTTATTCCAATGCGCAAATAAATCGTGGGACTGGGATGCCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGGTCTTGGATTAAAATTGGTAACGATGGGAATTTTGAGACAGTGAGACTTGACAAGGCAACTATAATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTTATTTATCCTTCAGCAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCGGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAGTCGCCTTAAGAATGAAAAAGCTGATGATCTACCTTTTGAAATTAGGGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGATCATTGTAATGCAAATTTCAGTGGCTCAAGACCAGGTAAACGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACTCTAAATCTGGAACGTGTTAGGAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTTATGGATGATGATGGTGACATGGCTGAGATGTGTCTAACTGAGAAAAAGAGAAGATCTGATACTTACACTATTAATGACTGTTTTCAAACTAATGCATCTGGTGGAGTGATTTCAAAGTCAGCTCCTGTTTCACCCGAGCGAACGACTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGTAAACATGGTAGCTCAATGGTCTCTTCTGATAACGAGGAAAGGATTGAGCCACTCGAAATGTTGCTTGAAGCATATTTTGTACTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAGTACATTGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCAGCTAATACAGTTTGAGCTGCTTCTTACAGCTGCTACATTGGTAGCTGCAGTATTTACTGCTGTAGCAGGTGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGATTCAATTTGGTTTTGGTAATTACTGGTATTGCTTGTATAGCATTGTATTTCGCTCTCCTATTTTATTTTAGGTACAAGAAAGTGCTTGCAGCTTAA 1281 0.3958 MDETQDQYYSSSLPEISLSRDGSVRSYSNAQINRGTGMPGLKKRGHGSRSWIKIGNDGNFETVRLDKATIMRNCSLPSRDLRLLDPMFIYPSAILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCSRLKNEKADDLPFEIRALELALELTCTSLDAQIIVMQISVAQDQVNELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTYTINDCFQTNASGGVISKSAPVSPERTTSGVQMLQRAFSSIGNSSKHGSSMVSSDNEERIEPLEMLLEAYFVLIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAVFTAVAGVFGMNFETTVFDYPSGFNLVLVITGIACIALYFALLFYFRYKKVLAA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01523 426 Gene3D Magnesium transport protein CorA, transmembrane region 126 357 - -
Vian10g01523 426 Gene3D Magnesium transport protein CorA, transmembrane region 364 424 - -
Vian10g01523 426 MobiDBLite consensus disorder prediction 29 48 - -
Vian10g01523 426 Gene3D - 40 122 - -
Vian10g01523 426 FunFam Magnesium transporter MRS2-1 39 122 - -
Vian10g01523 426 Coils Coil 213 233 - -
Vian10g01523 426 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 363 414 IPR045863 -
Vian10g01523 426 CDD Mrs2_Mfm1p-like 51 423 IPR039204 -
Vian10g01523 426 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 31 424 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01523 Vian-Chr10 25941401 25946829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01523 1 424 MRS2 Gene Family AT2G03620 62.014 1.80e-171 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01523 K16075 - gmx:100803935 707.983