Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01513 ATGTCACCAGATTTTCATCACCTTTTGTTCTTTCCTGAACTTGTTCAACTTCCCGTTCTCTCTGTTCAAGCAGTTCTGTGTGTTATCCTCTTCACTTTCCTTTTCACCATTTTCCTTACTCCTGGGGGCCTTGCCTGGGCTCTGTCCAAGTCATCGGCCCGAACCATTATCCCTGGTCCAGTAACGGCCCTGCTCGGAGTCTTTACCGGTTTAACTCCTCACCGGGAGTTGGCCAAACTGGCTCGCTCCCACAGTGCGGAGAAGCTCATGGCTTTCTCCATCGGCTTAACCCGGTTTGTTATTTCCAGCGAACCAGAAACTGCTAAGGAGATTCTGGGGAGTACTGGTTTTGCTGATAGACCGGTGAAGGAATCTGCTTACGAGCTTCTGTTTTATCGTGCTATGGGGTTCGCACCATACGGAGAGTACTGGAGGAACCTGAGGAGAATATCCGCTCTCCACCTCTTTTCTCCAAAGAGAATAGCCGGATTCCAAGGGTTCCGATGTGAGGTGGGGTTGAAAATAGTAGAAGAACTGAAAAAGGTTATGAGTGAGAACAGACACGTGGAGGTTAGAAAGGTACTTCATTTGGGGTCGTTGAACAATGTAATAATGACCGTTTTTGGGAAGTGTTATGGGTTTTATGAGGGTGAGGGGACTGAGCTTGAGGCGTTGGTGAGTGAAGGGTATGAGCTTTTGGGTGTGTTTAACTGGAGCGACCATTTTCCGTTGCTGGGGTGGTTGGATTTGCAGGGTGTGAGGAAGAGGTGCAGGAATTTGGTTGAAAAGGTTAATACTTTTGTTGGGAAGATCATTGAGGAACATAGGGTGAAGAGGGAGAAGGGTGAGTATGTGAAAGATGAAGCGATGTCTGATTTCGTTGATGTGTTGCTTGATTTGGAAAACGAAAACAAACTCAGCCAGGCTGATATGATTGCAGTGCTTTGGGAAATGATTTTCAGGGGAACAGACACAGTGGCAATTCTACTGGAGTGGATTTTGGCGAGGATGGTTCTCCACCCTGAGATACAAGCAAAGGCTCAAAGCGAAATAGACAGTGTGTGCGGATCCTCAAGACTGGTTTCTGATGCAGACATTCCGAACCTGCAATACCTTCAGTGCATTGTGAAGGAGGCTCTAAGGGTGCACCCACCGGGCCCTTTGCTGTCGTGGGCTCGTTTGGCGGTGCATGATGTGACTGTGGGAGACAAGCACATTCCAAAGGGCACGACGGCGATGGTGAACATGTGGGCAATCACGCACGACGAGAGGGTGTGGGCTGAACCGGAGAAGTTCAAACCGGAGCGGTTCATTGAGGAGGATGTGAGCATAATGGGAAATGATTTGAGGTTGGCTCCATTTGGGTCTGGGAGAAGAGTGTGTCCTGGGAAGGCCATGGGCTTGGCCTCTGTTCATCTCTGGCTTGCTCAGCTCCTTCAGAGTTTTGAATGGGTTGCTTCTGATGATGGTGCTGTGGATTTGGAAGAGCGACTCAAGCTTTCCATGGAGATGAAGAAGCCACTGTCTTGCAAAGTTGTGCCTAGGGTTGCTGTTTAA 1557 0.49 MSPDFHHLLFFPELVQLPVLSVQAVLCVILFTFLFTIFLTPGGLAWALSKSSARTIIPGPVTALLGVFTGLTPHRELAKLARSHSAEKLMAFSIGLTRFVISSEPETAKEILGSTGFADRPVKESAYELLFYRAMGFAPYGEYWRNLRRISALHLFSPKRIAGFQGFRCEVGLKIVEELKKVMSENRHVEVRKVLHLGSLNNVIMTVFGKCYGFYEGEGTELEALVSEGYELLGVFNWSDHFPLLGWLDLQGVRKRCRNLVEKVNTFVGKIIEEHRVKREKGEYVKDEAMSDFVDVLLDLENENKLSQADMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVCGSSRLVSDADIPNLQYLQCIVKEALRVHPPGPLLSWARLAVHDVTVGDKHIPKGTTAMVNMWAITHDERVWAEPEKFKPERFIEEDVSIMGNDLRLAPFGSGRRVCPGKAMGLASVHLWLAQLLQSFEWVASDDGAVDLEERLKLSMEMKKPLSCKVVPRVAV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01513 518 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 PANTHER CYTOCHROME P450 78A7-RELATED 22 515 - -
Vian10g01513 518 FunFam Cytochrome P450 78A5 49 515 - -
Vian10g01513 518 Pfam Cytochrome P450 71 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 CDD CYP78 85 508 - -
Vian10g01513 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vian10g01513 518 SUPERFAMILY Cytochrome P450 67 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01513 518 Gene3D Cytochrome P450 50 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01513 Vian-Chr10 25801597 25803483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01513 1 515 Cytochrome P450 AT1G13710 63.671 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01513 K20619 - gmx:100790231 852.818