Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01508 ATGGCTCTTTCTGATGGTCAGAAGAATAGAGGAGAATTGAGGATTCATGAGAGTTTGGACGAGCTAATGACCGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCATCAGTTAAAGAGCGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTCTGCGAAGCTCCGTATAACAAGACCGTGGACTGGTCCAAGTGGTATATTTTCTGGGCTGATGAGCGTGTTGTGGCAAAAAACCATGCTGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCCAAGGTTCCTATTGTCCCCAGTCATGTGCATTCTATTAACGATTCTGTGTCAGCAGAAGAAGCTGCTGAAGATTATGAGTTTGTGATTCGACAGTTCGTGAAAACACGTGTTGTCAGTGTCTCAGAGATTAGTGACTGTCCAAAGTTTGATCTCATTCTGCTGGGATTGGGTCCAGACGGCCACATTGCCTCATTGTTTCCCAACCACTCAGCACTGAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTCTCCCAAACCCCCACCTGAGAGAATCACATTCACCATGCCTGTCATCAATTCTGCATCAAATGTTGCAGTAGTTGTCACTGGTGACAGCAAAGCAGAATCTGTGCACTTGGCAATAGATGATCTTGGACCTGACTGCCCATTAATACCAGCCAGAATGGTCCAACCAGCTATGGGGAAGTTGGCGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGAATCCAATTTAAACAAGTAG 801 0.4444 MALSDGQKNRGELRIHESLDELMTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAAEDYEFVIRQFVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDSPKPPPERITFTMPVINSASNVAVVVTGDSKAESVHLAIDDLGPDCPLIPARMVQPAMGKLAWFLDKLAASKLEESNLNK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01508 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE 7 261 IPR039104 -
Vian10g01508 266 Coils Coil 19 39 - -
Vian10g01508 266 CDD 6PGL 20 251 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vian10g01508 266 FunFam Probable 6-phosphogluconolactonase 8 260 - -
Vian10g01508 266 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 19 249 IPR006148 GO:0005975
Vian10g01508 266 Gene3D - 8 261 - -
Vian10g01508 266 NCBIfam 6-phosphogluconolactonase 15 259 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vian10g01508 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 260 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01508 Vian-Chr10 25711337 25716490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01508 K01057 - gmx:100806593 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01508 10 25711337 25716490 Vian10g01508 10 25711337 25716490 ECH