Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01507 ATGGCGTGCCTTTCTTTTCCGCAGTTTCTCTCACTTCCTAGGTGCCACTTGACTTGGTCCTATTGTTGTACTTCTTTTAATACAGTGCAACTTGGGGAACTCAGGTCTGGGTGTAAATGGGGGCATGTGGCAACGGCTAGGAAAAAGGCTTCTCTAGACTCTGCCATAGAAGAACCCAGTGACAATGAATCTGTGGTTGAAAAGAAGACAACTAGGTCATCAAAAACTAAGAGCCCGGTCGGGAGGACAAGGAAGAAAGCAAAAGATGAGTCTCCTGAAGTAAATGATGGTTTGTTGGTAGATAGAGATGATGCCTCCATTGGAGAAAGTTCATCTGCCTCTATTGATACTTCCAAGAAAACTCGAAGGACTCGGAAAAAGGATGCATCTAGTTCTGCTGGCTTGGAAGAAAAGAAGGAAGTCAAGGAAGAGAAAAAGGTTAGAAGGCGAAGGAAAACTGAGGAGGTGAACTTAATTGTAGAGGATAAAGTTATTGAAGCTGGAATCAGTGACCAAGATGAGTCTTCATTTATTGAAAATGTGGAGGATGAGAGTGACATTGATTTGGCACTGATAAAAGATGTTGGAGATGACATTAGCTTTACTTATGGATGGCCTCCTCTTGTTTGTTGTTTTGGGGCTGCGCAGCATGCTTTTGTGCCTTCTGGGAGGCCAGCAAATAGGCTTATAAATCATGAAATTCATGAAAGCATGAAGGATGCCTTATGGAGCCCTGAAATATTTTTTAGGGCTCCAGGCTCCTCTGCTGGTAGTGTTGCTATTGCTCTTGCTACCTTGGGTGGCAAGGTGGCACTCATGGGAAAACTTGCAGATGATATTTATGGTGAAGCTATGCTGTACTATATGAATGCAAATAAAGTCCAGACCCGGTCAGTTCGAATTGATAATAAAAGGGCAACAGCTGTATCATTGATGAAGATTGGTAAAAGGAATCATCTTAAAATGAGTTGTGTGAAACCCTGTGCTGAAGATAGTTTGACGAAGACAGAGCTAAATATCGATGTGCTGAAAGAGGCAAAAGTGTTCTACTTCAATACACATTCTCTGCTTGATCGTAATATGAGGTCAACTACATTGCAAGCCATTAAGATTTCAAAGCATTTTGGAGGGTTTGTTTTCTACGATCTAAACCTTCCTATGCCACTGTGGCACTCTAGGGAGGAAACTATTTTGTACATTCAGCAATTCTGGAATCTTGCAGACATTATTGAGGTCACTAAGCAAGAACTAGAGTTCTTATGTGGGATAACACCATCTGAAGAATTTGACACCAAAAACAATGATAGTTTGAAGTTTATCCATTATGAACCCGAAGTGGTTGCTCCACTTTGGCATGAAAATCTTAAGGTTTTATTTGTGACTAATGGAACTTCCAAGATACATTATTACACAAAAGAACACGATGGTGCTGTTCTTGGAATGGAGGATGCCCCAATTACCCCATTCACTTGTGACATGTCAGCAACTGGAGATGGCATCGTTGCAGCCCTATTGCGGAAGTTGTCAGTTCAACTTGATTTAATAACTGATAAAGGATATCTGGAACATTCCATCAAGTATGCAATCAATTGTGGGGTTATAGATCAATGGATACAAGGCCGAGTTAGGGGCTTTCCTCCTCGTGAAGATATGGACGACGTAATTCCTGATTCAAATGGAATCAAGTCAATTTCAGAAAGAGAATACAGGACAGTAGGAGGACCTTCTGATGAGTAA 1737 0.4128 MACLSFPQFLSLPRCHLTWSYCCTSFNTVQLGELRSGCKWGHVATARKKASLDSAIEEPSDNESVVEKKTTRSSKTKSPVGRTRKKAKDESPEVNDGLLVDRDDASIGESSSASIDTSKKTRRTRKKDASSSAGLEEKKEVKEEKKVRRRRKTEEVNLIVEDKVIEAGISDQDESSFIENVEDESDIDLALIKDVGDDISFTYGWPPLVCCFGAAQHAFVPSGRPANRLINHEIHESMKDALWSPEIFFRAPGSSAGSVAIALATLGGKVALMGKLADDIYGEAMLYYMNANKVQTRSVRIDNKRATAVSLMKIGKRNHLKMSCVKPCAEDSLTKTELNIDVLKEAKVFYFNTHSLLDRNMRSTTLQAIKISKHFGGFVFYDLNLPMPLWHSREETILYIQQFWNLADIIEVTKQELEFLCGITPSEEFDTKNNDSLKFIHYEPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHDGAVLGMEDAPITPFTCDMSATGDGIVAALLRKLSVQLDLITDKGYLEHSIKYAINCGVIDQWIQGRVRGFPPREDMDDVIPDSNGIKSISEREYRTVGGPSDE 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01507 578 MobiDBLite consensus disorder prediction 116 151 - -
Vian10g01507 578 Coils Coil 135 155 - -
Vian10g01507 578 PANTHER HEXOKINASE FAMILY MEMBER 208 552 - -
Vian10g01507 578 MobiDBLite consensus disorder prediction 83 103 - -
Vian10g01507 578 Pfam pfkB family carbohydrate kinase 256 532 IPR011611 -
Vian10g01507 578 MobiDBLite consensus disorder prediction 51 74 - -
Vian10g01507 578 MobiDBLite consensus disorder prediction 50 151 - -
Vian10g01507 578 FunFam Fructokinase-like 2, chloroplastic 209 559 - -
Vian10g01507 578 CDD bac_FRK 208 542 - -
Vian10g01507 578 SUPERFAMILY Ribokinase-like 246 553 IPR029056 -
Vian10g01507 578 Gene3D - 209 562 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01507 Vian-Chr10 25704625 25707878 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01507 - - gmx:100786248 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01507 10 25704625 25707878 Vian10g01507 10 25704625 25707878 ECH