Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01502 ATGGCACTGCTCTCATGGATGTTGGCGGTGAAACTGAACTCGCGTCGAGGTGGTTATCTGTTCACGGTAGTCTCTTGTGATGATGGTGAAGTCTATGTGTCAAGTGATGGTGGCAGAAGGGTTCCCCTACTCTACGAGTTCGAGATTCTTGTTATTGCCATGAAGGAGGCTCATAGAGATTTGTTCTCGGTGAAGAAGATGAATGTTGAAGCGAACATTACGGAGTCGCTATTAGGGTTTTTGCTGTGGGGTTGTTACAGATTCCACAAGAACTCCTACAGAATGCCTCTCAATGTTTCCATAGCGAATTCACCTGAACCTCTAGTGGTTGGAGATTCCATAACTCCCACAGAATTGCTGAAATGGAACAGCTTAAGGTACTCAAGGAAAGGAATGCCTCCAGGGTCACTGGGATGGCCTTTTGTTGGGGAGACTATCAAATTTCTCACACAAGGACCAGATTTCATGAAAAGGGGCACATTAAGCCAAGTTGTCTCCTTTGCATTCAGACATGGAAGTCTCTTCAAAACTCATGTATTGGGATCTCCTACTGTTATTAGCACGGATCCTGAAATCAACAGATACATACTCATGAATGAAGCAAAAGGCTTGGTTCCTGGCTACCCGGACTCCATGAGGAAGATCCTTGGGACTAACATTTCTGAGGTTCATGGTGCAGAACACAAACGAATAAGAGGCTCACTGTTATCTCTCGTTGGTCCAATCGCAGTTAAGGATCGTCTTTTGACAGAAGTTGATGACTTCATGAGCTCTTACCTAGACAATTGGGATGCTGTGGTGGAAGATGAGCCAAACTCTTTCATCGAGTACTTCAAAGCCTCATTTGATAAAATGGCATTGGGAACAATATCCTTGCCATTTAAAATTCCAGGAACTCAATATTATCGAGGTTTGAAGGCTAGGGAAAAAGTGCTTGCAATGCTAAGAGAGCTGATAGCCAAGAGAAGAGCTTCTTCAGCTACTCATAACGACATTCTTGATCAACTTGTGAGAAATGAGGATGGTAAGTACAAGCTAAATGACGAAGAAATAATGGAGCAAATCACCACAATTTTATACTCAGGTTATGAAACGGTATCAACTACTACAATGATGTCTATCAAATACCTATGTGATAACCCTGACATTCTACAGGCAGATGAGCATTTTGCAATCTTGCAGAAGAAACTGCATGGAGAACGGATCAACTGGGATGACTACAAGAGCATGAGGCAAACTCGTGCGGTATTACTTGAGACAATGAGATTGGCTAGTGTTGTTAATGGAGTGATGAGGAGGACTACTAAAGATATAGAATTGAATGGTTATATGATTCCCAAGGGATGGAGGGTTTATGTTTACACAAGGGATGGTAACTTTGATCCCATTCTCTATGAAGAACCTTTTACTTTTAATCCAAGGAGATGGCTGGAGAAAGGGTTGGAGACTCATAATCACAACATGCTATTTGGAGCAGGAGGTAGGGTTTGTCCTGGAAAGGAATGGGGCATGTTCAAAATCAATGGGAAGAAGTTGAGGGAAGCAAAACACTTGCGAAATTTCCAAGAGTGGTGGCACCAACAGGACTACACATGA 1596 0.4273 MALLSWMLAVKLNSRRGGYLFTVVSCDDGEVYVSSDGGRRVPLLYEFEILVIAMKEAHRDLFSVKKMNVEANITESLLGFLLWGCYRFHKNSYRMPLNVSIANSPEPLVVGDSITPTELLKWNSLRYSRKGMPPGSLGWPFVGETIKFLTQGPDFMKRGTLSQVVSFAFRHGSLFKTHVLGSPTVISTDPEINRYILMNEAKGLVPGYPDSMRKILGTNISEVHGAEHKRIRGSLLSLVGPIAVKDRLLTEVDDFMSSYLDNWDAVVEDEPNSFIEYFKASFDKMALGTISLPFKIPGTQYYRGLKAREKVLAMLRELIAKRRASSATHNDILDQLVRNEDGKYKLNDEEIMEQITTILYSGYETVSTTTMMSIKYLCDNPDILQADEHFAILQKKLHGERINWDDYKSMRQTRAVLLETMRLASVVNGVMRRTTKDIELNGYMIPKGWRVYVYTRDGNFDPILYEEPFTFNPRRWLEKGLETHNHNMLFGAGGRVCPGKEWGMFKINGKKLREAKHLRNFQEWWHQQDYT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01502 531 PRINTS B-class P450 signature 488 497 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PRINTS B-class P450 signature 460 475 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PRINTS B-class P450 signature 432 459 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 Pfam Cytochrome P450 273 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 SUPERFAMILY Cytochrome P450 125 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01502 531 PANTHER CYTOCHROME P450 26 130 503 - -
Vian10g01502 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Vian10g01502 531 Gene3D Cytochrome P450 123 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01502 Vian-Chr10 25625054 25635138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01502 189 508 Cytochrome P450 AT5G38970 50.000 3.52e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01502 K09590 - gmx:100818004 636.721