Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01499 ATGGCTGACCCTTCTCCCAAACCCGTTCCTCTGCTGAAGGACGAGCTCGACATCGTGATCCCCACGATCCGAAACCTCGACTTCCTCGAGATGTGGCGGCCATTCTTCGAGCAGTACCACCTCATCATCGTTCAGGATGGTGATCCCAATAAGATCATCAAAGTCCCCGAAGGCTTTGACTACGAGCTCTACAATCGCAACGATATCAACAGGATCTTGGGCCCCAAGGCCAATTGCATCTCCTTCAAGGACTCTGCTTGTCGCTGCTTCGGCTACATGGTCTCCAAGAAGAAGTACATCTACACCATCGACGACGATTGCTTCGTTGCTAAGGACCCTTCTGGAAAAGATATCAATGCACTCGAACAGCACATTAAGAATCTGCTAAGTCCAGCCACTCCATTTTTCTTCAACACCCTTTATGATCCTTATAGAGAAGGTGCTGATTTCGTCCGTGGATACCCTTTCAGTCTTCGTGAGGGTGCCCCCACTGCTGTTTCTCACGGTCTCTGGCTCAACATACCTGATTATGATGCACCAACACAGCTTGTCAAACCCCGAGAGAGGAACACCAGGTATGTTGATGCTGTTCTTACCATTCCTAAAGGAACATTGTTCCCTATGTGTGGTATGAATCTGGCCTTCGATCGTGAGCTGATTGGACCTGCAATGTACTTTGGACTCATGGGAGATGGTCAACCTATCGGACGATACGATGATATGTGGGCTGGTTGGTGTGTTAAGGTTATCTGTGACCATTTGGGGTTGGGAGTGAAGACGGGGCTTCCATACATATGGCACAGCAAAGCAAGCAACCCATTTGTGAATCTGAAAAAGGAGTACAAAGGCATCTTCTGGCAAGAAGAGATCATTCCCTTTTTCCAAAGTGCCACCCTCCCAAAAGACTGCACCTCTGTCCAAAAATGCTACATTGAACTTTCGAAGCAAGTGAAAGAGAAGCTTGGTGCTGTTGATCCCTACTTCAACAAGCTTGCAGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACAACAACACCTCTGAACAAACTTCTTCAAAGCAAGCCAATGGGGCTGCCAAGTGA 1092 0.4799 MADPSPKPVPLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPNKIIKVPEGFDYELYNRNDINRILGPKANCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPATPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLPKDCTSVQKCYIELSKQVKEKLGAVDPYFNKLADAMVTWIEAWDELNNNTSEQTSSKQANGAAK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01499 363 PIRSF UPTG 7 350 IPR004901 GO:0016866|GO:0071669
Vian10g01499 363 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 222 IPR029044 -
Vian10g01499 363 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Vian10g01499 363 PANTHER UDP-ARABINOSE MUTASE 7 349 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01499 Vian-Chr10 25586746 25589610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01499 K13379 - gmx:100809983 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01499 10 25586746 25589610 Vian10g01499 10 25586746 25589610 ECH