Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01485 ATGATGGAATCCCACATGATAGAGTCAAGTAGGAATAGCATCAATAGCTGTGTACTACTACACCTCTTTTTGTTGGTAACATTCATCCATTTAATCTCTTGTTATCCAATTAATGTCCCTGATAAAATCCTCCTAAACTGTGGTACTTCTGAAGCATCATCATTCAATGGAAATATTTGGGTAGGAGATGGTGTATCTAGTTTCTTGCCTCCACAGTATGGCAACAGCTCTTCCACACTCTTGCTCTCAAACATGAAAGACTCTCTAGTACCAAAAGTTCCATACTCAACAGCAAGAATAACTCATTCTCCATTGACCTACTCCTTTCCTTCCTCCCCTGGCCTTAAATTCATTCGTCTTTACTTTCTCTCATCTTTATATCTGATGATGATCCCCTCCGACAAGGCTTATTTCTCTGTAAAAACTGGGCCTTACACTCTTGTAAGTGATTTCAATCCATCAGATTTTGCAGAAGAGCTAAACTCGAAGTTTTTCACCAAGGATTTCTTACTAAATGTTAGGGAAGACAAACTGACCATTACACTTACTCCATCTCCTTTAATTTCCAAAGCATTTGCTTTTGTAAATGGCATTGAGATATTCCCGGTGCCCAAAAGTATATACTTTCCGTTTTCCAAGGTTCCTGTTCCTTACCTTGGGCACCAGAAAATTTTGTTGACTAATGATGAATATGCTCTAGAGACGCTTTACAGAGTTGGCATTTGTGGTGGAGAAAATGCTTTTGGAATGTGGTCAGATGATTCTAGATACATATCTCGTTCACACATTGGAGGTGTCCTCAATATAAAGTCTGTTACTGTTAGCTTGAATTACACCACTTTATCTTCAAAGGATTACAATTATTCAGCACCGGAGGAGATATATTGGACTGCCAGGACAATGGGTAGTGATGGAGATGCTAACATGAAGTACAATTTAACATGGTCTTTCCCTGTTGATTCTGGATTCAAGTACCACGTTAGGCTTCATTTCTGTGAGATATCTATTGGGGTAACGAAGCCCAATCAAAGGGTGTTCAAAGTGTACATAAACAACCAAACAGCAGAGGAGAGGATGGACGTAGTTGCTTCTGCCGGAGCACCATTTACTCCTTTGCACAAGGACTATGTTGTTATGGTTCCTACGGAAACTGGGAGGAGGAAAGATTTGTGGATCTCGCTTCAACCAAACTTGGAGTCAAAACCAAAATATGCCGATGCCATACTGAATGGAATTGAGATCATGAAGATAAGTGATAGTAATCATAGTCTTGCAGCAATGTTCCAGTTGAGAAGCGAACAAAGAAAGAAGAAAGGTCAACATGTCATCATTGTGGTTGCTGCTACTTTAGGTACTATCTTCGGACTGCTCTTCACACTTTTCATTAATATCCACAGAGCAGGGAAAAAATTGAAGTGGAGAACTTCTAATATACTTCCATCAAATTCTAGTAGAAGTCACAAAAACATTCAACCCACAGTAACCTCAGGTCTTTGCCATCAATTCACACTTGAAGAAATCAGCATAGCTACAAGCAACTTCAGTGAAGATCTAGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAAAGGCATCATGCATCATGATGGAGTTACTGCTGTTGCAGTAAAGCGCTCTAATCGTAGATCTGGTCAAGGATATAAAGAGTTTCAAACTGAGATCAATTTTTTCTCATTCTGTCACATGAATCTAGTGTCACTACTGGGATACTGCCAAGAGGGAAATGAACTGATACTTGTGTATGAATACATGGCTGAGGGTCCTCTGTCTGACCACTTATACAAGAAAAGAAAACAGCCACTGTCTTGGATTCAAAGAATAAAGATCTGTATTGGTGCAGCTCGAGGACTACATTACCTCCACACTAGCACAAGGCACCCAGTGATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATGAGAATTGGGTAGCCAAGATTGCAGATTTTGGGTTGTGTAGAACAGTTCCCTCACTTTACCACTCACATGTAAGCACGGAGGTTAAAGGTACTTTAGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTCAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTGTTTGAGGTGTTGTGTGGAAGAGCAGCTGTGAATCCTGTGGCAGTGGAAGAGGAAAATGAGAAAGTTGGATTGGCTACATGGGCCATGCACTGTTACAAGTGTGGAAGCATCGATGAATTAGTTGATCCTCATTTAGCAGGGAATGTTAGGCCAGAATGCCTGAGGGCGTTTGTGGACTTAGGCATCCACTGCTTGGCTGATAGAACTGCAGATAGGCCAACTATGGGAGAGGTCCTCAATACTTTAGAGAGGATCCTTTACTTGCAGGATAGTTTAGAGGAACAAGAACCTCATACAATTTCTGCAATGGCTAGTGATTAG 2439 0.408 MMESHMIESSRNSINSCVLLHLFLLVTFIHLISCYPINVPDKILLNCGTSEASSFNGNIWVGDGVSSFLPPQYGNSSSTLLLSNMKDSLVPKVPYSTARITHSPLTYSFPSSPGLKFIRLYFLSSLYLMMIPSDKAYFSVKTGPYTLVSDFNPSDFAEELNSKFFTKDFLLNVREDKLTITLTPSPLISKAFAFVNGIEIFPVPKSIYFPFSKVPVPYLGHQKILLTNDEYALETLYRVGICGGENAFGMWSDDSRYISRSHIGGVLNIKSVTVSLNYTTLSSKDYNYSAPEEIYWTARTMGSDGDANMKYNLTWSFPVDSGFKYHVRLHFCEISIGVTKPNQRVFKVYINNQTAEERMDVVASAGAPFTPLHKDYVVMVPTETGRRKDLWISLQPNLESKPKYADAILNGIEIMKISDSNHSLAAMFQLRSEQRKKKGQHVIIVVAATLGTIFGLLFTLFINIHRAGKKLKWRTSNILPSNSSRSHKNIQPTVTSGLCHQFTLEEISIATSNFSEDLVIGEGGFGKVYKGIMHHDGVTAVAVKRSNRRSGQGYKEFQTEINFFSFCHMNLVSLLGYCQEGNELILVYEYMAEGPLSDHLYKKRKQPLSWIQRIKICIGAARGLHYLHTSTRHPVIHRDVKSANILLDENWVAKIADFGLCRTVPSLYHSHVSTEVKGTLGYLDPEYYKRRKLTQKSDVYSFGVVLFEVLCGRAAVNPVAVEEENEKVGLATWAMHCYKCGSIDELVDPHLAGNVRPECLRAFVDLGIHCLADRTADRPTMGEVLNTLERILYLQDSLEEQEPHTISAMASD 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01485 812 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Vian10g01485 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Vian10g01485 812 Gene3D Transferase(Phosphotransferase) domain 1 591 809 - -
Vian10g01485 812 FunFam Receptor-like protein kinase FERONIA 591 809 - -
Vian10g01485 812 FunFam receptor-like protein kinase FERONIA 477 590 - -
Vian10g01485 812 ProSitePatterns Protein kinases ATP-binding region signature. 520 544 IPR017441 GO:0005524
Vian10g01485 812 CDD STKc_IRAK 520 791 - -
Vian10g01485 812 SUPERFAMILY Protein kinase-like (PK-like) 484 788 IPR011009 -
Vian10g01485 812 FunFam FERONIA receptor-like kinase 42 204 - -
Vian10g01485 812 Gene3D - 43 203 - -
Vian10g01485 812 Gene3D - 232 418 - -
Vian10g01485 812 ProSiteProfiles Protein kinase domain profile. 514 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g01485 812 Pfam Malectin-like domain 45 417 IPR024788 -
Vian10g01485 812 PANTHER OS07G0166700 PROTEIN 499 795 IPR045272 GO:0004714|GO:0006468
Vian10g01485 812 Pfam Protein tyrosine and serine/threonine kinase 519 786 IPR001245 GO:0004672|GO:0006468
Vian10g01485 812 FunFam FERONIA receptor-like kinase 231 418 - -
Vian10g01485 812 SMART serkin_6 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01485 Vian-Chr10 25344775 25347213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01485 31 812 Receptor kinase-like Gene Family AT3G51550 43.985 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian10g01485 Malectin_like 6.4e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01485 - - gmx:100776324 1201.04