Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01450 ATGATGAGTGAGATGGAAATCGAGAGATACACCAGTCAGCGGTGGCGTCCAATAGATGATCAGGTCAAGATGATGACCAACATCTTCAACTATGGGGTCACTCATCCAAGCCGAGCGCAAGTCGTCGAGATCACGTCTCGACTAAGGACCTTCGGAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAACCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGCCGCTGTATATAATATGGCTGGGTGGTAATGAGGGCACCGAGGCTGTTGGACCTCTTCCCCATTCCCATCATAATCGATCCAGAAACAGAGATTCCTCCGCCTCCGCTCGTGACTTTTCGTACCAGAGCTCCCTCAACGGAGCTCTCCCTTAG 414 0.529 MMSEMEIERYTSQRWRPIDDQVKMMTNIFNYGVTHPSRAQVVEITSRLRTFGDASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYIIWLGGNEGTEAVGPLPHSHHNRSRNRDSSASARDFSYQSSLNGALP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01450 137 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 79 IPR044559 GO:0003700
Vian10g01450 137 Pfam Homeodomain 12 72 IPR001356 GO:0003677
Vian10g01450 137 SUPERFAMILY Homeodomain-like 13 74 IPR009057 -
Vian10g01450 137 MobiDBLite consensus disorder prediction 102 137 - -
Vian10g01450 137 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01450 Vian-Chr10 24782268 24782769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01450 1 76 Wox Gene Family AT5G59340 36.842 4.12e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian10g01450 Homeodomain 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01450 - K04190 var:108339433 179.104