Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01409 ATGAACGTGGATCTGGAGTCATTAGCAGAGGCCACTTCTGGGGCCATAGGGTCACTCATCAGCACCACTATTCTCTACCCACTTGACACCTGCAAGACCAAGTACCAAGCCGATGCTCGTTCCCATGGTCGCACAAGATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAACGGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGATACAGTTATTTTAAAAGACTATATCTAGATAAAAGTGGTTATAAATCCATTGGAACGAAAGCAAACTTAGTTATCGCTGCTGCAGCTGGGGCTTGCACTGCCATTGCGACTCAGCCCCTGGACACAGCCTCCTCTAGGATGCAGACAAGTGCATTTGGAAAGTCTAAAGGGCTACTGAAAACCCTTACCGAAGGAACTTGGAGTGACGCATTTGATGGCCTCAGTATTTCCTTGCTGTTGACATCAAACCCTGCAATTCAGTATACCGTGTTTGATCAGCTGAAACAGCGAGCACTGAAGAATAAACAAAGTAAAGCTGAAAAAGGATCATCTCCTGAATCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCAATTTCAAAGAGCATTGCTACATGTCTTACATATCCAGCTATCAGGTGCAAAGTCATCATTCAAGCTGCTGACTCAGATGAAGCAAACTCCAAAAATAAGATAAAATCACAGAAAACAGTGTCTAGTGTTCTCTATGGAATATGGAAAAGGGAGGGGATAGTGGGATATTTTAAAGGATTGGAAGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAGAAGATCTCAGCTACTACTTGGGTGCTTATCCTTGCACTTAAAAGGTACCTATTACTTCCAGCAAAAAGTTAA 945 0.4243 MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQADARSHGRTRYRNLTDVLLEAISNGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLDKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQSKAEKGSSPESLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSDEANSKNKIKSQKTVSSVLYGIWKREGIVGYFKGLEAQILKTVLSSALLLMIKEKISATTWVLILALKRYLLLPAKS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01409 314 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Vian10g01409 314 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Vian10g01409 314 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Vian10g01409 314 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Vian10g01409 314 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Vian10g01409 314 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Vian10g01409 314 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Vian10g01409 314 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Vian10g01409 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Vian10g01409 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Vian10g01409 314 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Vian10g01409 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Vian10g01409 314 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 310 IPR045900 GO:0005347|GO:0006635|GO:0015217
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01409 Vian-Chr10 24145419 24148422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01409 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 26.733 1.32e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01409 - - gmx:100301879 554.288