Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01398 ATGTGGATACGAGGATTCAGATTTTGGATCAAAGGCTGTACTTTGTTGGCGTTAATATCTGCAATTTCCGCTCTGGAACCCGAACTGGGATCGACTCGCGTCGTCTTTCAGACAAAGTATGGGGACATTGAATTTGGTTTCTATCCAACCGTTGCACCCAAAACTGTTGACCACATTTTTAAGCTCGTGCGACTTGGAGGATATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTTGTGGCCCAAGTAGCAGATGTCTCGAATGGGAGATCGGCTCCCATGAATGAGGATCAGAAAAGAGAGTCTGATAAGACTGTTGTTGGTGAATTTAGTGACGTCAAACATGTTCGGGGTATTCTTTCCATGGGAAGGTATGATGATCCAGACAGTGGTTCATCCTCATTTTCAATACTACTTGGAGATGCTCCTCATCTTGATGGAAAGTATGCAATATTTGGAAAAGTTACTAAAGGCGATGAGACATTGACAAAGCTCGAGCAACTACCTACCCGCAAAGAGGGTATATTTGTAATGCCAATGGAACGCATCACTATCTTGTCATCTTATTACTATGACAAAGAGACAGAAAATTGTCAGCAAGACAGATCAGTTTTGAAGCTCAGACTAGCTGCCTCAGCTGTTGAAGTTGAACGACAGAGGATGAAATGCTTCCCCTGA 681 0.4302 MWIRGFRFWIKGCTLLALISAISALEPELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVSNGRSAPMNEDQKRESDKTVVGEFSDVKHVRGILSMGRYDDPDSGSSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMPMERITILSSYYYDKETENCQQDRSVLKLRLAASAVEVERQRMKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01398 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Vian10g01398 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Vian10g01398 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Vian10g01398 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Vian10g01398 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 187 IPR002130 GO:0000413|GO:0003755
Vian10g01398 226 CDD cyclophilin 35 188 - -
Vian10g01398 226 SUPERFAMILY Cyclophilin-like 31 194 IPR029000 -
Vian10g01398 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 15 226 IPR044233 -
Vian10g01398 226 Gene3D - 22 198 IPR029000 -
Vian10g01398 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 41 191 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01398 34 192 U-box Gene Family AT5G67530 27.160 2.04e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01398 - - gmx:100819238 419.853