Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01345 ATGGCTACAAACGACTTGAAGCTTTTGGGTTGTTGGTCCAGCGCTTTTTCTCTAAGGGTGCAGATTGCCCTTGACCTGAAGGGTGTAGATTATGAGGTTATTGAAGAGACCTTTAATCCCAAAAGTGAACTTCTTCTTAAATCAAATCCTGTGCACAAGAAAATCCCAGTTCTCATCCATGCAGATAAACCCATATGTGAATCTGCAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCCCCCATCCTTCCACAAAATGCCTATGATCAAGCTAATGCCCGATTTTGGGTTGCTTACATCGATGACAAGTGGTTTTCGGCCTTCAAAGGTATTCTAATGGCTGAAGAGAATGATGAAGAAAAGGAGGCAGAGTTTAAGGAAGCAGAAGAAGTGTTTGAGAGGATGGAAGAAGTGATGAACAAGGGCAGTGAAGGAAAGGCCTTTTTCGGAGGAGACACCATTGGATTCATTGATATTGGTTTTGGATGCTATCTGAGTTGGATCAGAGTGTTGGAAAAGATGAATGCAAGAAAATTGATTGATGAAAACAAGCACCCTGGCTTGATCCGATGGACTGAAAATTTTGCTGCTCATCCTGCTGTCAATGGCCTTATACCAGACACTGACAAGCTTCTTGAAGTTGCCAAGGGTTACAAGGAAAGATCTCGTGCAGCTGCAAACTAA 693 0.4271 MATNDLKLLGCWSSAFSLRVQIALDLKGVDYEVIEETFNPKSELLLKSNPVHKKIPVLIHADKPICESAIIVEYIDEVWTHAPPILPQNAYDQANARFWVAYIDDKWFSAFKGILMAEENDEEKEAEFKEAEEVFERMEEVMNKGSEGKAFFGGDTIGFIDIGFGCYLSWIRVLEKMNARKLIDENKHPGLIRWTENFAAHPAVNGLIPDTDKLLEVAKGYKERSRAAAN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01345 230 Gene3D - 86 229 - -
Vian10g01345 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 216 IPR045073 -
Vian10g01345 230 Gene3D Glutaredoxin 1 85 - -
Vian10g01345 230 Pfam Glutathione S-transferase, C-terminal domain 101 202 IPR004046 -
Vian10g01345 230 FunFam Glutathione S-transferase GSTU6 1 86 - -
Vian10g01345 230 FunFam Glutathione S-transferase U9 86 228 - -
Vian10g01345 230 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Vian10g01345 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vian10g01345 230 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vian10g01345 230 CDD GST_N_Tau 6 79 - -
Vian10g01345 230 SFLD Main (cytGST) 2 228 - -
Vian10g01345 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 221 IPR010987 -
Vian10g01345 230 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vian10g01345 230 Coils Coil 114 141 - -
Vian10g01345 230 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Vian10g01345 230 CDD GST_C_Tau 90 221 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01345 Vian-Chr10 22873614 22874447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01345 1 227 Glutathione S-transferase Gene Family AT1G10370 53.509 4.23e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01345 K00799 - gmx:547576 294.664