Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian10g01344 | ATGGCTAAAAACGATTTGAAGCTTTTGGGTGGGTGGTTCAGCCCTTATGCCTTAAGGGTGCAGATTGCCCTTAACCTGAAGGGTGTAGATTACGAGGTTATTGAAGAGACCTTGAATCCCAAAAGTCAACTTCTTCTTAAGTCCAATCCTGTACACAAGAAAATCCCAGTTCTCCTCCATGCAGATAAAACTATATGTGAATCTGCAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCCCCCATCCTTCCACAAAATGCCTATGATCGAGCTAATGCCCGATTTTGGGTTGCTTACATCGATGACAAGTGGTTTTCGGCCTTGAAAGGTATTCTTATGGCTGAAGAGAATGATGAAGCAAAGGAGGCAGAGTTTAAGGAAGCAGAAGAAGTGTTTGAGAGGATGGAAGAAGTGATGAACAAGGGCAGTGAAGGAAAGGCCTTTTTCGGAGGAGACACCATTGGATTCATTGATATTGGTTTTGGAAGCTTTCTGAGTTGGATCAGAGTGTTGGAAAAGATGAATGCAAGAAAATTGATTGATGAAAACAAGCACCCTGGCTTGATCCGATGGACTGAAAATTTTGCTGCTCATCCTGCTGTCAATGGCCTTATACCAGACACTGACAAACTTATTGAAGTTGCCAAGGCTTTTAATCAAACATTAAAGGCTCGTGCAGCTGCAAACTAA | 699 | 0.4249 | MAKNDLKLLGGWFSPYALRVQIALNLKGVDYEVIEETLNPKSQLLLKSNPVHKKIPVLLHADKTICESAIIVEYIDEVWTHAPPILPQNAYDRANARFWVAYIDDKWFSALKGILMAEENDEAKEAEFKEAEEVFERMEEVMNKGSEGKAFFGGDTIGFIDIGFGSFLSWIRVLEKMNARKLIDENKHPGLIRWTENFAAHPAVNGLIPDTDKLIEVAKAFNQTLKARAAAN | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian10g01344 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 221 | IPR010987 | - | |
| Vian10g01344 | 232 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
| Vian10g01344 | 232 | SFLD | Main.3: Omega- and Tau-like | 2 | 230 | IPR045073 | - | |
| Vian10g01344 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 77 | IPR004045 | - | |
| Vian10g01344 | 232 | SUPERFAMILY | GST C-terminal domain-like | 77 | 223 | IPR036282 | - | |
| Vian10g01344 | 232 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
| Vian10g01344 | 232 | FunFam | Glutathione S-transferase U9 | 86 | 228 | - | - | |
| Vian10g01344 | 232 | CDD | GST_N_Tau | 6 | 79 | - | - | |
| Vian10g01344 | 232 | Gene3D | - | 86 | 230 | - | - | |
| Vian10g01344 | 232 | SFLD | Main (cytGST) | 2 | 230 | - | - | |
| Vian10g01344 | 232 | FunFam | Glutathione S-transferase GSTU6 | 1 | 87 | - | - | |
| Vian10g01344 | 232 | CDD | GST_C_Tau | 90 | 221 | IPR045074 | GO:0004364|GO:0006749 | |
| Vian10g01344 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 83 | IPR004045 | - | |
| Vian10g01344 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 9 | 215 | IPR045073 | - | |
| Vian10g01344 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 102 | 202 | IPR004046 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian10g01344 | Vian-Chr10 | 22860233 | 22861112 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian10g01344 | 1 | 219 | Glutathione S-transferase Gene Family | AT1G10370 | 55.000 | 1.30e-81 | 241 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian10g01344 | K00799 | - | gmx:547576 | 316.235 |