Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01338 ATGAATCCGCGAGGGCGGCTGCCGGGATCCAAGAACAAGCCGAAGCCGCCGGTGATGATCACCAGGGAAAGCGCCAACACGCTCCACGCGCACATCCTTGACGAGGTAGGCAGCAGATGCGACGTGTTCGACAGCGTCGCCAGTTACGCGTGGCGGCGACAACGCGAGATCTGTATTTTGAGTGGCAACGACACCGTGACGAATAGGGGTAAGTTGAAGGGTGATGGTGAGCATGGTGGGTTAGAAGATTTACAAGAGGGTGGACAATTGGAGGTTGATGGTGAAGGTGTAAAACAGGTGGAGGAGGGTGGTCAGTCAGAGGATGATGGTGAAGGTGGAAAACAGGTGAAGGAGGGTAGTCAGTTAGAGGATGGATATGATTTTGAGTTAAAGAAAGTAGATGATGATAATGATAGTGAATTTGAGTTAGAGCATGTACACGATGACAATGATAGTGAATGTGAGTCTTTGAGTTAA 477 0.499 MNPRGRLPGSKNKPKPPVMITRESANTLHAHILDEVGSRCDVFDSVASYAWRRQREICILSGNDTVTNRGKLKGDGEHGGLEDLQEGGQLEVDGEGVKQVEEGGQSEDDGEGGKQVKEGSQLEDGYDFELKKVDDDNDSEFELEHVHDDNDSECESLS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01338 158 MobiDBLite consensus disorder prediction 95 126 - -
Vian10g01338 158 MobiDBLite consensus disorder prediction 64 126 - -
Vian10g01338 158 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 68 IPR014476 GO:0003680
Vian10g01338 158 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01338 Vian-Chr10 22726787 22734153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01338 3 68 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 74.242 1.59e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01338 - - mnt:21406036 108.227