Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01319 ATGATGTTTCTTCTTCTTGTGAGCCTTGTTGTTTTGCAAGGCTTTCTAATACCAACCTGCTATTGCCAGATCAATACTCCTCAGAATATTGAAACATTTTATCCAATCCAAACTTCGGAATCACCCCTCCCAATCCAACCTTTTCAGCCACAGGCATCACCACCATCATCAGGACCAGTGGCTGCAACAAAAGCCTCTTCATCAAACAGTAAGGTAGGAACAGCAGTAGCTGCAACTGCAGCAAGCACTCTTGTTGTTTCTGGTTTGGTTTTCTTCTTTGTTAGAAGGTGCTCCAGAACAAGGAAGAGAAAGGAGACAAGTAAGAACACCGCTTCTGCTGCCGAAAGGCATGTTTCACCTCAGGTGGAGGTGTTTGAGAGAATGGAAGGAAACGTGAAGGGACTGATCGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGTAAAAAGATACCACAAAAGGATTTTCAAAGGGAGGTGTTGGATAGTCCCAAAGATGAAGAAGGTGATCATGAGGGAAATCCAGGGAAGATAACTGAATTCATTCAAGAAACTCCTCTTCTTAGAGAGAAATCTTCAACTTCCCACATGAACATATTTCTTCCAGAAGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCACTGTTCCTTCATCGGTTGGAAGCTCTCCTACACATTCATCTTCTCCTTCCTTTACCCCTTCATCACCAAAACCAATCTCCACTTCTTTCTCATCAATTCCAAACATTACAAATTCTGCAACACCATTGGCCCCTCCAAAAGTACCTGATAAAAAGAATGAAGCTCCGATACCAGCATCAGCACCACCACCTCCTCCACCAATCATAGATGAAAAGAAGTCACCACAACCACCTCCTCCTCCTCCTCCAATTCCAAAAATCATGAACTCAGCAGTAGCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCAATCCCTCCTAGAAAGAGTCCAGCACCACCACCTCCTCCACCAAAGGCAAGTGGTTTGAAGTCATCATCAAAACCGCCACCTAATCCAATTGAAAGAGCAGCAGGTACCACAAGTAAGCAAGGAGACACTTCACCTGAGGTGAAACTAAAGCCACTACATTGGGATAAGGTGAATACAAACCTTGATCATTCTATGGTGTGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCAGGGTAGTCGCCACCAACCGAAATGATAATGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAAGGATGCTTTGGCTCTATCATCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCTATTGTTTTGAAATCTTTGACAGTCTCTCGTAAAGATATTATTGATGCACTCATTGATGGTCATGGCCTTAATATAGAAACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAACAATCACTTGTACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAAACTTTCCTACGCCACATCCTCAAAGCTGTTCCTTCAGCTTTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCCGAGATTCTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGATGGGGTGCAAGGAGCTTCGAAAACAAGGAATCTTTGTCAAACTTCTTGAAGCTGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACACAGAGGGGTAATGCTCAAGCTTTCAACATGGCTTCTCTAAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACACTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTCAACCGCAACCACAGTTTGAGTCGTAGTAGCAGCAGGAACAGTAACAAGAGTGATGACTCTCAAAATTCTTCTGCTTCAAATGAACAAAGACAAAAGGAATATATAACACTAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAGTTTTCCAACGTGAGGAAAGCTGCGATTACAGATTACAGCACTTTTGTTGGTTCAATCTCAGCACTCTCGGCCAAGATTCTTGAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGGAACTTTGTGAAAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTAGTGAGGGAAGAGCAAACAAGGGTGATGCAAATTGTGAAAAAAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGATATTGTAGAGCACCCTCTTTATCTATTTGTCATAGTAAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 2412 0.4283 MMFLLLVSLVVLQGFLIPTCYCQINTPQNIETFYPIQTSESPLPIQPFQPQASPPSSGPVAATKASSSNSKVGTAVAATAASTLVVSGLVFFFVRRCSRTRKRKETSKNTASAAERHVSPQVEVFERMEGNVKGLIVDEDGLDVIYWRKLEGKKIPQKDFQREVLDSPKDEEGDHEGNPGKITEFIQETPLLREKSSTSHMNIFLPEESYTIMRIPPPAPPPTVPSSVGSSPTHSSSPSFTPSSPKPISTSFSSIPNITNSATPLAPPKVPDKKNEAPIPASAPPPPPPIIDEKKSPQPPPPPPPIPKIMNSAVASPPPPPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPNPIERAAGTTSKQGDTSPEVKLKPLHWDKVNTNLDHSMVWDKMDRGSFRVDDDLMEALFRVVATNRNDNAPKENNSTSSSKDALALSSNAFLLDPRKSQNIAIVLKSLTVSRKDIIDALIDGHGLNIETIEKLGRVAPTEEEQSLVLAYEGDPSKLAEAETFLRHILKAVPSAFKRLNALLFRLNYDSEILEIKEFLQTLEMGCKELRKQGIFVKLLEAVLKAGNRMNAGTQRGNAQAFNMASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRNSNKSDDSQNSSASNEQRQKEYITLGLPVVGGISSEFSNVRKAAITDYSTFVGSISALSAKILEIRELVSQCGNDKGGNFVKEMNRFLENAEEELRLVREEQTRVMQIVKKTTDYYQGGASKDIVEHPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01319 803 Gene3D Formin, FH2 domain 384 802 IPR042201 -
Vian10g01319 803 SUPERFAMILY Formin homology 2 domain (FH2 domain) 377 798 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 271 345 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 213 227 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 630 658 - -
Vian10g01319 803 Coils Coil 722 749 - -
Vian10g01319 803 SMART it6_source 364 798 IPR015425 -
Vian10g01319 803 MobiDBLite consensus disorder prediction 160 181 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 631 658 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 228 264 - -
Vian10g01319 803 ProSiteProfiles Formin homology-2 (FH2) domain profile. 364 803 IPR015425 -
Vian10g01319 803 PANTHER FORMIN-RELATED 296 794 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vian10g01319 803 MobiDBLite consensus disorder prediction 160 182 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 44 65 - -
Vian10g01319 803 MobiDBLite consensus disorder prediction 213 376 - -
Vian10g01319 803 Pfam Formin Homology 2 Domain 368 783 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01319 Vian-Chr10 22401222 22403717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01319 23 799 FH2 protein (formin) Gene Family AT1G70140 44.332 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01319 - - gmx:100780368 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01319 10 22401222 22403717 Vian10g01319 10 22401222 22403717 ECH