Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01315 ATGAGAGGATTGAGACTTACACCTTTGTTTGTCCTTTCGTATTGTATTGTTGTCAACCAGGATCGCTGTAACATTTTGTGTGACATTAGCTGCACAGCAAGGATCAACATTCATGGCTGCATTTCAAGTCTGTCTGCAGGTTTGGTTGGAGTGGCTCTTGCTGATGGTTTGGCATTTGCAGGCACGTTTCCTTTTCTTAACACTGGTGTAGCTTTGTGGCATGTTTCCTTTTGCTTGGATGATGTGTTTAGTTGTGCAGAGGCTATTTTGGGAAAATCCAACACAACCGACCCGGAGCTCCTCTTCAAGCTCTCGCTACGCGTCGCCATTAACGAGCTCTCCAAGCTCTCCAACGTCCCTTCCAAGCTCCGTGCCAATGCGATCAACGTCTGCAGTTCCGTCATCGGTGACGCGCTGGACCGCCTCAACGACTCCATCTCCGCGCTCGGAACCGTCACCGGAAGGATTGTTTCTTCGACGAGCGTCAACAATGTGGAGACGTAG 504 0.498 MRGLRLTPLFVLSYCIVVNQDRCNILCDISCTARINIHGCISSLSAGLVGVALADGLAFAGTFPFLNTGVALWHVSFCLDDVFSCAEAILGKSNTTDPELLFKLSLRVAINELSKLSNVPSKLRANAINVCSSVIGDALDRLNDSISALGTVTGRIVSSTSVNNVET 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01315 167 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 167 IPR035513 -
Vian10g01315 167 Pfam Plant invertase/pectin methylesterase inhibitor 85 156 IPR006501 GO:0004857
Vian10g01315 167 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 152 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01315 Vian-Chr10 22340257 22345248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01315 84 167 Carbohydrate Esterase AT1G53840 44.211 2.75e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01315 - - pvu:PHAVU_010G123100g 110.538