Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01312 ATGGGGTCAGTGTTTGACTATACCAACCCTCCAAGTGGTGAAATCTACTTGAGATTCCAAGTCAGTGGCAGTGCAGGGATTTATTGGGTTCAGTCCAGGAATGCTATCTCTAGTGATTGGACGGCCAGAGCAACATATGACACTATGTGTGAAAGCATGGGAGCAGTGGAGAAGAAGCTTGAGGAAATGGAGATAGAATACGCGCGTGGAACGGTGGAAGAAGGCGGGATCAAAGTGGATCAGTTGTTTTTTCATGACCCAGATGGGTTCATGATTGAGATATGCAACTGTGATATCCTTCCCGTGATTCCCTTACCAAGTGACATGGTTGCTGCTGCCATTTCCAGTGAGACCAAACCACACCATTTCAATCCTCTATTTCGCGTTGCTCTGCGTCTGCGTCTTCGTCTCGTTGTCAGCCCGCCTCTGATTCAAAGCTTCAAGCGAGATTAG 453 0.4768 MGSVFDYTNPPSGEIYLRFQVSGSAGIYWVQSRNAISSDWTARATYDTMCESMGAVEKKLEEMEIEYARGTVEEGGIKVDQLFFHDPDGFMIEICNCDILPVIPLPSDMVAAAISSETKPHHFNPLFRVALRLRLRLVVSPPLIQSFKRD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01312 150 Gene3D - 48 101 IPR029068 -
Vian10g01312 150 Gene3D - 1 47 IPR036749 -
Vian10g01312 150 PANTHER - 49 114 - -
Vian10g01312 150 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 50 99 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01312 Vian-Chr10 22291785 22307528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01312 1 48 Expansin Gene Family AT4G17030 62.500 7.67e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01312 - - var:108346725 128.257