Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01299 ATGGGAGATGTGGCAAAGGACCTAACTGCTGGGACTATTGGGGGGGTGGCGCAATTAATAGTTGGCCACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCCCTCCCGGGCCAGCTTCCCAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGTGCCCCACTTGCCACAGTAGCAGCTTTCAATGCTGTTCTGTTTTCAGTTAGGGGGCAAATGGAAGCATTACTAAGGTCGCATCCTGGTGCTACTCTCACAGTAAATCAGCAGGTTGTTTGTGGAGCTGGAGCTGGAATTGCCGTTTCGTTTCTAGCTTGCCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTGCATTAGCTGGCACTGGAGCAGGTACCGTGGCAGTGAAATATGGGGGACCCATGGATGTAGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCATAAGAGGTCTGTTCAAGGGCATGGTTCCCACTATGGCTCGTGAAGTACCTGGAAATGCTGCATTGTTTGGTGTATATGAAGCACTAAAGCAATTACTTGCTGGTGGTACTGATACTTCGGGACTGGATAGAGGTTCTCTGTTGCTCGCTGGAGGCTTGGCCGGAGCTGCATACTGGCTCGCAGTTTACCCAACTGATGTTGTCAAGAGTGTGATTCAAATAGATGATTACAAAAACCCTAAGTTCTCGGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTACTGAGGGGTTCAAAGGCCTATATAAGGGTTTTGGTCCAGCAATGGCCCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGCATGA 894 0.4911 MGDVAKDLTAGTIGGVAQLIVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMEALLRSHPGATLTVNQQVVCGAGAGIAVSFLACPTELIKCRLQAQSALAGTGAGTVAVKYGGPMDVARQVLRSEGGIRGLFKGMVPTMAREVPGNAALFGVYEALKQLLAGGTDTSGLDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQIDDYKNPKFSGSIDAFRRISATEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01299 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Vian10g01299 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Vian10g01299 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Vian10g01299 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Vian10g01299 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Vian10g01299 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Vian10g01299 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Vian10g01299 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Vian10g01299 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Vian10g01299 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01299 Vian-Chr10 22077820 22079084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01299 22 291 Antiporters AT1G79900 33.935 5.55e-41 142