Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01267 ATGAAATCTGTCGAATTGAAGGACAGGGATATCTCGGACAACGTTCCTCGCTCTTTTCGCCTAGGTAGATGCATGCCTGGTTATGAGCATCCTCACAAATCATTCAGAACAAGAAACACTACAATGGCTTCAACTCAAAACCCTTTCACTGTTTTCCTTATGCTCTCAGTCTTTTGCCTCTCGCTAATCTCCACAGTCAAATCAGACTCGTTTTCTTTCAACCTACCCAGTTTTGAGCCGGGTGTTAGAAGCGTACTAGTGGGTGATGATGCCAAGACAGTAGATGGAGTGTTACAACTCACCAACAAGGACACAAGCGGCAATCCAACTCAAGAAAGCGTTGGCCTGGCAGCATACTTTGGACCACTTCATCTCTCTGACGCAAAAACTGGAAGACTCGCAGACTTCGACACCGAGTTCTCCTTCGTTGTCAACACACATCGTGCGTCACTGCACGGCGACGGCTTCACCTTCTTTCTTGCATCAGTCGACTTTGATTTCCCTGACAACTCCACCGGTGGCTTCCTCGGACTTTTCAACTCCGAAACAGCATTCAACACCTCTTTAAACCAAGTGGTTGCTGTTGAGTTTGATAGCTTTGCAAATGAATGGGACCCCAACTTCCCACAGTCTGATTCTCCTCACATAGGAATTGACATTAATTCCATTAGGTCCGTGGCAACTGCCCCATGGCCACTTGATATTCAACAAGGATCAATTGGAAAGGCACGCATAAGCTATCAATCTTCCGCCAAAATATTGAGTGTCTCGGTGGCTTATTCAGATAGTTCTGTGAGTCCGAACACCGTTGTTTTATCGTATCCCATCAATTTAGGGACTGTTTTGTCAGAGTGGGTCCTGATCGGTTTCTCTGGTACCACCGGTGACTTGGTTGAAACACACGACATTCTTTCCTGGTCTTTCAATTCCTTCTTGTAA 939 0.4601 MKSVELKDRDISDNVPRSFRLGRCMPGYEHPHKSFRTRNTTMASTQNPFTVFLMLSVFCLSLISTVKSDSFSFNLPSFEPGVRSVLVGDDAKTVDGVLQLTNKDTSGNPTQESVGLAAYFGPLHLSDAKTGRLADFDTEFSFVVNTHRASLHGDGFTFFLASVDFDFPDNSTGGFLGLFNSETAFNTSLNQVVAVEFDSFANEWDPNFPQSDSPHIGIDINSIRSVATAPWPLDIQQGSIGKARISYQSSAKILSVSVAYSDSSVSPNTVVLSYPINLGTVLSEWVLIGFSGTTGDLVETHDILSWSFNSFL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01267 312 PIRSF Plant_L_lectin 41 312 IPR016363 GO:0030246
Vian10g01267 312 Gene3D - 68 312 - -
Vian10g01267 312 ProSitePatterns Legume lectins beta-chain signature. 193 199 IPR019825 -
Vian10g01267 312 ProSitePatterns Legume lectins alpha-chain signature. 282 291 IPR000985 -
Vian10g01267 312 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 49 310 - -
Vian10g01267 312 CDD lectin_legume_LecRK_Arcelin_ConA 71 312 IPR001220 GO:0030246
Vian10g01267 312 SUPERFAMILY Concanavalin A-like lectins/glucanases 70 311 IPR013320 -
Vian10g01267 312 Pfam Legume lectin domain 71 310 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01267 Vian-Chr10 21244419 21245463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01267 42 312 Receptor kinase-like Gene Family AT5G10530 36.861 3.54e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01267 - - gmx:100804280 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02106 1 25615412 25617451 Vian10g01267 10 21244419 21245463 PCT