Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01266 ATGGAACGTTTTCACTCTCTTAGTACTCTGTCTTCTGCAATTGAAATGGCTTCATCACCAGAGACAGAGCATCCCAACAAGGCATTTGGATGGGCAGCCAGGGACATTTCTGGTATTCTCTTCCCTTTCAACTTCTCCAGAAGGGCAACAGGAGAGAAAGATGTTGCAATTAAAGTAATGTACTGTGGAATATGTCACTCAGACTTACATATGTTAAAGAATGAGTGGAGCTGTTCAATCTATCCTATTGTTCCTGGACACGAGGTTGCTGGTGTGGTGACTGAAGTGGGAAGCAAGGTGAAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTAGGGGGCATGGCTGGATCCTGTAAATCCTGTCAGAATTGTAGTGAAGATCTCGAGAATTATTGTCCCAAAATGATTTTCACATACAGTGGCAAGCATGTTGATGGCACCATAACATACGGAGGCTACTCTGACTCAATGGTTGTAGATGAACACTTCGTGGTTCGAATTCCAGATAACCTACCTCTTGATGCTGCTGCACCTCTCCTTTGTGCTGGAATCACAGTGTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGACTTCATATCGCTGTGGTTGGTCTTGGTGGAATCGGTCACATGGCTGTCAAGTTTGCCAAAGCTCTTGGGCTTAAGGTTACAGTGATTAGTACATCTCCCAGTAAAGAGAGGGAAGCAATTGAACATATGGGAGCTGACTCATTTGTTGTTAGTCATAAACAAGATGAGATGATGGCTGTAATGGGAACCTTTGATGGAATCATTGACACAGTTTCTGCTAATCATTCTCTCGTGCCTTTGATTGGCCTGTTGAAGACTAATGGTAAATTAGTCATGATTGGTTCACCGGAGAAGCCTCTGGAGGTTCCAGCATTTGCCTTACTTACGGGAAGGAAGCTGGTTGGTGGCAGTGCAATTGGAGGGATGAAAGAGACGCAAGAAATGATCGACTTTGCTGCGAAACATGATGTGAAACCTGATATCGAAGTTATTGAAATGGATTATGTGAACACTGCAATGGAACGCCTCCTCAAATCAGATGTGAAGTATCGATTTGTTATTGATATTGGAAACACGTTGAAGCCAAGTTCCTGA 1131 0.4332 MERFHSLSTLSSAIEMASSPETEHPNKAFGWAARDISGILFPFNFSRRATGEKDVAIKVMYCGICHSDLHMLKNEWSCSIYPIVPGHEVAGVVTEVGSKVKKFKVGDRVGVGGMAGSCKSCQNCSEDLENYCPKMIFTYSGKHVDGTITYGGYSDSMVVDEHFVVRIPDNLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHIAVVGLGGIGHMAVKFAKALGLKVTVISTSPSKEREAIEHMGADSFVVSHKQDEMMAVMGTFDGIIDTVSANHSLVPLIGLLKTNGKLVMIGSPEKPLEVPAFALLTGRKLVGGSAIGGMKETQEMIDFAAKHDVKPDIEVIEMDYVNTAMERLLKSDVKYRFVIDIGNTLKPSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01266 376 FunFam Uncharacterized protein 31 181 - -
Vian10g01266 376 Gene3D - 182 338 - -
Vian10g01266 376 SMART PKS_ER_names_mod 34 366 IPR020843 GO:0016491
Vian10g01266 376 PANTHER ALDEHYDE REDUCTASE 20 371 IPR047109 GO:0016616
Vian10g01266 376 Pfam Alcohol dehydrogenase GroES-like domain 53 166 IPR013154 -
Vian10g01266 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 86 100 IPR002328 GO:0008270|GO:0016491
Vian10g01266 376 Pfam Zinc-binding dehydrogenase 209 332 IPR013149 -
Vian10g01266 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 337 IPR036291 -
Vian10g01266 376 FunFam Putative cinnamyl alcohol dehydrogenase 6 339 368 - -
Vian10g01266 376 FunFam Cinnamyl alcohol dehydrogenase 182 338 - -
Vian10g01266 376 SUPERFAMILY GroES-like 38 199 IPR011032 -
Vian10g01266 376 Gene3D - 31 368 - -
Vian10g01266 376 CDD CAD1 29 367 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01266 Vian-Chr10 21193108 21196415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01266 27 375 Monolignol Biosynthesis Gene Families AT4G37990 68.768 1.18e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01266 K23232 - mtr:11405462 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01266 10 21193108 21196415 Vian10g01266 10 21193108 21196415 ECH