Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01263 ATGACCACAACGCCGCCTTCACTACATGTCAAGCTTATAGATCAAGAAACAACGTCACCAGATACGTTAGACATACATTACATTGAAATGGCTGCACAAGCTGAACTTGAGCATCCCAGAAAAGCATTCGGATGGGCAGTTAGGGACCCTTCTGGTTTTTTCTCACCTTTCAATTTCTCCAGAAGGGAAGCTGGTGAAAAAGACGTTGCATTCAAAGTGTTGTATTGTGGGATATGTCACTCTGATCTCCACAACGCAAAGAACGAATGGGGCACTTCCACCTATCCACTAGTCCCAGGTCATGAGGTGACTGGTGTAGTGACAGAAGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGGGACAAGGTGGGTGTGGGATGCTTGGTTGATTCCTGCCGCAGCTGCCAGAACTGTTCTGACAATCTTGAGAATTATTGTCCACAATATACTCTCACGTATGGTGCCAAATATAAAGATGGTAGCATCACATATGGAGGTTACTCTGATTCAATGGTTGCAGATGAACACTTTGTGGTTCGAATTCCTGATGGCCTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGCATCACAGTTTATAGCCCTCTCAGATATTTTGCCCGAGACAAACCTGGTCTGCATGTGGGTGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTAATTTTGCAAACTCTGAAAAAATTATTGGTCTATTATGAACTCTAA 732 0.4481 MTTTPPSLHVKLIDQETTSPDTLDIHYIEMAAQAELEHPRKAFGWAVRDPSGFFSPFNFSRREAGEKDVAFKVLYCGICHSDLHNAKNEWGTSTYPLVPGHEVTGVVTEVGSKVEKFKVGDKVGVGCLVDSCRSCQNCSDNLENYCPQYTLTYGAKYKDGSITYGGYSDSMVADEHFVVRIPDGLPLDAAAPLLCAGITVYSPLRYFARDKPGLHVGVVGLGGLGHMAVILQTLKKLLVYYEL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01263 243 PANTHER ALDEHYDE REDUCTASE 35 230 IPR047109 GO:0016616
Vian10g01263 243 Gene3D - 196 231 - -
Vian10g01263 243 CDD CAD1 43 207 IPR047109 GO:0016616
Vian10g01263 243 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 100 114 IPR002328 GO:0008270|GO:0016491
Vian10g01263 243 Pfam Alcohol dehydrogenase GroES-like domain 67 180 IPR013154 -
Vian10g01263 243 Gene3D - 45 195 - -
Vian10g01263 243 SUPERFAMILY GroES-like 47 213 IPR011032 -
Vian10g01263 243 FunFam Uncharacterized protein 45 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01263 Vian-Chr10 21125942 21127025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01263 40 216 Monolignol Biosynthesis Gene Families AT4G37990 70.621 1.97e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01263 K23232 - var:108320064 400.208