Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01261 ATGGGCAGATGCAATTTGCAGTTTACAAGAGAAGATAAAGTCAAACAGTGTGAAGATCTAAAAGTGAAGTACAACGAAGAGATGACAAAGAGAAAGAAACTCTTCAACGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGATGCCGTCCATTGAATAAGGCTGAAATCTCAGCTGGATACAATACGGTTGTGGATTTTGATGCAGCAAAGGATGGATCCCTTGGAATTTTGACAAGTGGCTCCGTCAAAAAATCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTAGATGGCTACAATGTTTGCATCTTTGCTTACGGGCAAACCGGAACAGGGAAAACCTTCACCATGGAAGGAACACAGCAGAACAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACTTTTTCATATGACATATCTGTTAGTGTTCTTGAGGTTTACAACGAACAAATCAGAGACTTATTGGCTAGTGGACAAACATCAAAAAGATTGGAGATAAAACAAGCTTCTGAAGGATTTCATCATGTTCCTGGTGTAGTAGAAGCCAAAATTGATAGCATAAATGAAGTGTGGAGTGTATTGCAGACCGGAAATAATGCTAGAGCAGTTGGAAGTAACAACGTTAATGAGCATAGCAGTCGATCTCATTGCATGCTATGTATAACAGTAAAGGCTAAAAACTTGTTGAATGGAGACTGTACCAAGAGCAAGCTTTGGCTCGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGCTCAAGGGGAACGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTAGTATCTGCTTTGGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTAACACATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACTCTGATGTTTGTACAAATAAGTCCATCAGACCAGGACGTAGGTGAGACCCTGAGCTCGATTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGCCCTGTTAAGAGGCAAATTGATACAAGTGAACTTCAAAAGTTGAAAGCAATGCTCGAAAAAGCACGGAGTGATTGCAGAATTAAAGATGAATCTATGCGAAAACTTGAGGAAAATTTGCAAAGCTTGGAGAGTAAGGCCAAAGGTAAGGACCAGATTTACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGACAGATTGAGTTGAAGAAAGCCATGCAAAGTGAATCAGAGAAACAAGTCTCTCAATTATCTGACAAATTGAAAGGGAAAGAAGAAACCTGCAGTTCTCTCCAACAAAAGGTGAGAGAGCTAGAGAAAAGGATGAAAGAACAACTGCAGTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGATCTAGAGAAAAGGCTGAAAGATCAGATGCAAGAGTCTGACTCTGAATCTGCCATTTTGAAAGATAAGATAAAGGAGCTTGAGAGGAAACTGAAAGAGCAGGAGAAGAGCTCAATGTCCATGCTTCATCAACAGATGAAGCAACTAGAGGACAGATACAGAGAGCGAGAGCAACAGTGGCAACAAACACAAAGTTATGTGGATGCAGTAAGGGCCACACCAGATATAGGTAAAAGCTTCATGAATGAAGAATGTTCAAGCGAGATTGAGGCTGGCATTTTAAGGTGTTCAGACTCAGTAAACCGCCAGGCAAGCCAAGGTTCTTCTTTGTTCAAAGGGAGTGATTCTACTAATAATAAGATAAGAAGCAGAACAAGAGAGTTCAGAAGCAATGATGAAAACAACTTTGTCATGTCTTCATTGCACGATAGAAGAGTCATAAGGAAATCTGATCCACCCAAAATAATGAGGAGTGTAAGGCCAACACCAAGACCAGCCACTGCTAATCAAGCTCCAGTTTCTCACAAGAGAACTAGTACAAGCAGAGATCAGGTTCAAGGAATAAGAGAGAGGGAAAGTAAGAAGAAAATTTGGTCAAGATAG 2085 0.4005 MGRCNLQFTREDKVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGYNTVVDFDAAKDGSLGILTSGSVKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLEHLFKVSKERSETFSYDISVSVLEVYNEQIRDLLASGQTSKRLEIKQASEGFHHVPGVVEAKIDSINEVWSVLQTGNNARAVGSNNVNEHSSRSHCMLCITVKAKNLLNGDCTKSKLWLVDLAGSERLAKTDAQGERLKEAQNINRSLSALGDVVSALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSINFATRVRGVELGPVKRQIDTSELQKLKAMLEKARSDCRIKDESMRKLEENLQSLESKAKGKDQIYKNLQEKIKELEGQIELKKAMQSESEKQVSQLSDKLKGKEETCSSLQQKVRELEKRMKEQLQSESASFQQKVWDLEKRLKDQMQESDSESAILKDKIKELERKLKEQEKSSMSMLHQQMKQLEDRYREREQQWQQTQSYVDAVRATPDIGKSFMNEECSSEIEAGILRCSDSVNRQASQGSSLFKGSDSTNNKIRSRTREFRSNDENNFVMSSLHDRRVIRKSDPPKIMRSVRPTPRPATANQAPVSHKRTSTSRDQVQGIRERESKKKIWSR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01261 694 ProSiteProfiles Kinesin motor domain profile. 44 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 SMART kinesin_4 42 374 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 MobiDBLite consensus disorder prediction 598 694 - -
Vian10g01261 694 MobiDBLite consensus disorder prediction 676 694 - -
Vian10g01261 694 Pfam Kinesin motor domain 50 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 Coils Coil 387 499 - -
Vian10g01261 694 PRINTS Kinesin heavy chain signature 267 285 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 PRINTS Kinesin heavy chain signature 236 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 PRINTS Kinesin heavy chain signature 316 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 PRINTS Kinesin heavy chain signature 118 139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01261 694 MobiDBLite consensus disorder prediction 632 649 - -
Vian10g01261 694 Coils Coil 24 44 - -
Vian10g01261 694 Gene3D - 368 532 - -
Vian10g01261 694 MobiDBLite consensus disorder prediction 657 675 - -
Vian10g01261 694 FunFam kinesin-like protein KIN-14R 3 368 - -
Vian10g01261 694 SUPERFAMILY Tropomyosin 382 564 - -
Vian10g01261 694 Coils Coil 504 553 - -
Vian10g01261 694 CDD KISc_C_terminal 42 368 - -
Vian10g01261 694 MobiDBLite consensus disorder prediction 598 612 - -
Vian10g01261 694 PANTHER KINESIN-LIKE PROTEIN KLP-3 13 447 IPR027640 GO:0003777|GO:0007018
Vian10g01261 694 ProSitePatterns Kinesin motor domain signature. 266 277 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian10g01261 694 Gene3D Kinesin motor domain 3 367 IPR036961 -
Vian10g01261 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 402 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01261 Vian-Chr10 21094499 21098241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01261 16 420 Calmodulin-binding Proteins AT5G65930 40.436 1.13e-87 297