Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01237 ATGGCGGAGCAGAGTAACCGCTGGAGCTGGAACATCACCGGCTTCGAGCCGTGGAAGTCGACGTCGACGTCTCCTTCGCCGGAGCAAAACGATCAGAAACCATCTACACCGTTTGCGAGAAGAAACTCTACCTCCTCGGTTCCTTCGCACTCCGTGGCTTCCAAAGTTGAGGAATTAAGAGACAAGGTTAAGCTTGCAAGAAATGACTACCTGCAGTTAAGACAAGAAGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGACCGAGTGACACGATATCTTGGTGTTCTTGCGGAGAAAGCCCACAAGTTAGATCAATCTTCGCTTGAAACTGAGGCAAGAATATCTTCTGTGATCTATGAAAAGAAGAAATTGTTCAATGACTTATTGACATCTAAAGGTAACATAAGGGTATTCTGCCGAGCTAGGCCATTATTTGAAGATGAAGGTTTCTCAGTTGTTGAATTTCCAGATGATTATACCATACGAGTAAATACTGGCGATGAATCCTTGTCTAACTCAAAGAAAGAATTTGAATTTGACAGAGTTTACGGACCTCATGTTGGACAGGCTGAGTTGTTCAGTGATGTTCAACCAATGGTGCAATCAGCTTTGGATGGATATAATATTTCCTTATTTGCATATGGACAAACACATTCTGGAAAAACACACACTATGGAAGGATCAAGCTATGATAGGGGATTATATGCTCGTTGCTTTGAGGAGTTGTTTGACTTGTCCAACTTGGACACAACTGCTACTTCTCAATATACATTCTGCGTTACTGTTTGTGAGCTCTATAACGAACAGATAAGGGATCTGATCTTGGAGTCAGGGAAAAACTTGCCTAAACTGTGTTTTGCTTCACCTGAATATCTCATAGAACTAATGCAGGAAAAAGTTGATAACCCTATGGAATTTTCTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATAATCCATTAAAGATTACTGTTTCTCATTTGATTGTTACCATACACATATTTTATAACAATTTGATCAGCGGTGAAAACTCATATAGCAAGTTGTCTCTGGTTGATTTGGCTGGAAGTGAAGGTTTGATATCAGAAGATGATAGTGGTGAGCGTGTCACAGATATGCTTCATGTTATGAAGTCACTTTCAGCGCTGGGAGATGTATTATCTTCTTTGACATCAAAAAAGGATGTTATTCCTTATGAAAACTCAGTGTTGACGAAACTACTTGCAGATTCTCTTGGTGGAAGTTCAAAATCTCTGATGATTGTAAATGTGTGTCCAAATTCTTCGAATTTATCTGAGACATTACTGTCTCTCAATTTCTCTGCCAGAGCTCGTAATTCTGTCTTAAGCCTTGGAAATCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGTAAAGAGTTATATGAGAAGGAAAAAGAAATCCAAGATCTCAAACAAGACGGTCTGAGACTTAAGCAAGCACTTAGAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTACAAAAGGCATGGAAAGTTTCGTCTGCATTGCAGACAGATTTAAAGGCAGAGCATATTTTGCTGGCAGAGAAAGAAGAAAATTCTCAGCTTAGAAATCAAGTTGCTCATATGTTACAGTTAGAAAAAGCACAAAATTTGCAGATACAACAGCGCGATTCAACCATTAAAAGTTTGGAGGCCAAAATTGGAAGCCTTGAAATACAACTCAATGAAGCCCTTAGATCGAGCAACACTAGGTTAAATGTTGTACCAGAAACTGTTTCTGGAGCTCTACCTAATTCCAGGACAACAGGGGATGTCATGGATTCATCTACATTAACCAATAAACTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGTAGAAAATGAGAAATTATTTGATAAGTTGACTGAGAAAGCATCTCTGGCTGGATCACCTAAGCTGTCAAGTCCATTATCTAGGGGATCAATTAATGTTGAGCCTGGAAATTTGGGCAGCACCACTGCAAGAGCTCGTTCTATGGATGTTCTTCCTTCATCTTTTGTCACAGATAAGAATGAAGGAACTGTTGCTTTAGTTAAATCTGGTTCTGAGAGAGTTAAGACTACCCCGGCTGGTGAATATCTTACTGCAGCACTGAATGACTTTAATCCTGATCAGTATGAAGGACTTGCTGCCATTTCTGATGGTGCAAACAAGCTTCTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCCAGAGAACACGAAATACTTGCTGAAATTAGAGATGCTGTTTTTTCATTTATTCGAAAAATGGAGCCAAGGCGAGTAATGGATACCATGCTTATTTCCCGTGTTAGAATCTTGTATATAAGATCTTTGCTTGCCAGATCCCCAGAGTTGCAATCCATTAAGGTATTGCCAGTTGAGTGCTTTCTTGAAAAGTCCAACACTGGACCCAGTAGAAGTTCCAGCCGAGCAAGCAGTCCTGGAAGATCTTCAGTGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATATAAAGCCAGAAAAGAAATCGAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGAAACCTGGAGACAGCAGGTAACTGGGGGAAAGCTTAGGGAAATCAGTGAGGAAGCAAAAAGTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCTGGAGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCCGAGAAGTTTGATTTTCTATCTATTATGGGAAATGATGCACCGGGGGGAACAAATGGTCAGTTGGAGCTTATTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGCAGTGCCCTTTCTCCCCAAACTGATGCCCTTGGCCAACTTCTATTTGAATATTCAAGACGTGTCTATACTTCTCAACTGCAGCACTTGAAGGATATTACTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCGGCACAAGTGGCCAAGTTGCGTTCAGCACTAGAATCTGTTGATCACAAAAGAAGAAAGATTTTACAACAAATGAGAAGTGATGTAGCTTTACTGACCTTGGAAAATGGTGGTTCACCTGTTCAAAATTTTTCTACTGCTGCTGAGGATGCAAGATTAGCGTCTCTTATTTCACTTGATAGAATATTGAAGCAAGTCAAGGATATAACTAAACTTTCTACTGTGAACACCATCGAGAAAAGTAAGAAAAGAACGGTGCTTGGTTCTCTAGACAAACTGACAGAACAAATGTCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGTACATTGCAGATGCTCGCAGAGTGGTTGAGTCAATTCCTGAAGAAGATGACCGCAGTCAGAACCTATCACATTCTCGTATGTCATCTACTGATACAGGCTCTGGGTCTGGAACTGATGTGGCACAGTGGAACGTCCTTCAATTCAATACGGGTAATACCTCCTCATTTATAATAAAATGTGGAGCAAACTCAAATTCAGAACTAATCATTAAAGCCGAGGCTCGAGTTCAGGAACCTAAAGAAGGTGAGATTGTGAGGGTTGCCCCAAGGCCGTCCATTTTGGAAAATTTGAGCTTGGAGGAAATGAAACAAGTATTTGCTGAACTACCCGAGGCTCTAAGATTGCTTGCCCTAGCAAGGACTGCAGATGGAACTCGAGCACGATATTCTAGATTATATAGGACTTTGGCTATGAAGGTTCCATCACTTAGGGATCTGGTAAGTGAGCTTGAAAAAGGGGGTGCACTGAAAGATGTGAGGACTTGA 3825 0.4099 MAEQSNRWSWNITGFEPWKSTSTSPSPEQNDQKPSTPFARRNSTSSVPSHSVASKVEELRDKVKLARNDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKAHKLDQSSLETEARISSVIYEKKKLFNDLLTSKGNIRVFCRARPLFEDEGFSVVEFPDDYTIRVNTGDESLSNSKKEFEFDRVYGPHVGQAELFSDVQPMVQSALDGYNISLFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNLDTTATSQYTFCVTVCELYNEQIRDLILESGKNLPKLCFASPEYLIELMQEKVDNPMEFSRVLKAAFQSRGNNPLKITVSHLIVTIHIFYNNLISGENSYSKLSLVDLAGSEGLISEDDSGERVTDMLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGSSKSLMIVNVCPNSSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIQDLKQDGLRLKQALRDANDQCVLLFNEVQKAWKVSSALQTDLKAEHILLAEKEENSQLRNQVAHMLQLEKAQNLQIQQRDSTIKSLEAKIGSLEIQLNEALRSSNTRLNVVPETVSGALPNSRTTGDVMDSSTLTNKLEEELKKRDALIERLHVENEKLFDKLTEKASLAGSPKLSSPLSRGSINVEPGNLGSTTARARSMDVLPSSFVTDKNEGTVALVKSGSERVKTTPAGEYLTAALNDFNPDQYEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPRRVMDTMLISRVRILYIRSLLARSPELQSIKVLPVECFLEKSNTGPSRSSSRASSPGRSSVQYVDEQIQGFKVNIKPEKKSKFSSVVLKIRGIDEETWRQQVTGGKLREISEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAEKFDFLSIMGNDAPGGTNGQLELISTAIMDGWMAGLGSALSPQTDALGQLLFEYSRRVYTSQLQHLKDITGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPVQNFSTAAEDARLASLISLDRILKQVKDITKLSTVNTIEKSKKRTVLGSLDKLTEQMSSLLEIDHPCAQRYIADARRVVESIPEEDDRSQNLSHSRMSSTDTGSGSGTDVAQWNVLQFNTGNTSSFIIKCGANSNSELIIKAEARVQEPKEGEIVRVAPRPSILENLSLEEMKQVFAELPEALRLLALARTADGTRARYSRLYRTLAMKVPSLRDLVSELEKGGALKDVRT 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01237 1274 MobiDBLite consensus disorder prediction 652 673 - -
Vian10g01237 1274 Coils Coil 56 83 - -
Vian10g01237 1274 Gene3D Kinesin motor domain 80 450 IPR036961 -
Vian10g01237 1274 MobiDBLite consensus disorder prediction 1 52 - -
Vian10g01237 1274 Coils Coil 564 584 - -
Vian10g01237 1274 MobiDBLite consensus disorder prediction 819 839 - -
Vian10g01237 1274 ProSiteProfiles Kinesin motor domain profile. 136 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 Pfam Kinesin motor domain 143 449 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 ProSitePatterns Kinesin motor domain signature. 350 361 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vian10g01237 1274 MobiDBLite consensus disorder prediction 1125 1149 - -
Vian10g01237 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 486 IPR027417 -
Vian10g01237 1274 SMART kinesin_4 134 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 Coils Coil 460 501 - -
Vian10g01237 1274 PRINTS Kinesin heavy chain signature 208 229 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 PRINTS Kinesin heavy chain signature 351 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 PRINTS Kinesin heavy chain signature 400 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian10g01237 1274 Coils Coil 619 639 - -
Vian10g01237 1274 PANTHER KINESIN-LIKE PROTEIN KLP-3 50 620 IPR027640 GO:0003777|GO:0007018
Vian10g01237 1274 MobiDBLite consensus disorder prediction 1 55 - -
Vian10g01237 1274 FunFam kinesin-like protein KIN-14B isoform X1 83 451 - -
Vian10g01237 1274 MobiDBLite consensus disorder prediction 820 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01237 Vian-Chr10 20620286 20667699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01237 123 451 Calmodulin-binding Proteins AT5G65930 35.777 1.36e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01237 - - gmx:100810330 2180.6