Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01236 ATGGATCATTTCAAAGGATCCGAATCCGAAAACCCTATCACCACATGCCTTTCCTTGCTCTCCCTCCGCCGTTTTTCTGACTGCCGTGACTTTGCCTGCGGCCTTCCTCCCACCGACATCGTGGCAAGAGTCCTTGCCATCGCCAACATCCTCTCCTCCGCTGACTTCTACTCCATCCTCCAGCTCCACCGATCCGACTGCGCCAACCGCGACCTCGCACGGCGGCAGTATGCGAAGCTGGCACTCCTCCTGGACCCGACGAACCCTGACAAGTTTCCCTTTTCCGACGAGGCCCTTGCACGTGTGCAGGAGGCTTGGCACGTGCTGTCCCGTCCTGAACTCCGCGCCCTCTACGACCGCGAGCATCCAGTCCCTGAAACTGCAACGTTTTGGAGTGCGTGTCCCTACTGCTGGAACCTCTTTGAGTATGAGAAGATGTATGAGGATTGCGCGCTGTTGTGTCAGGTTTGCGGGAAAGTGTTCCAGGGCGTGCCAGTGAAACCACCTTCGATGGTGGGGGAGGCAGTGTTGGAGGGAAAAGAGCTTCGACAGTACTACTCGTGTGACGCGAGTGTGCCCTTGAGGTATTACGAGGTCAAAGAGGAGATTAAGAGTAGTAACACATTTAGTGAGCAAAATGCTGCATCCTTTGTGTACATTTCTGATGATGATGATAATGAAGAGTTTGTCACTGAAGGGTTGCAAGAATATCCTAAGGGACTAAGGAGAAGGAGGATGAGGGTAAAAACTGTGGCCAAGAAGGGTGGAATAAGGAGAAGATGA 783 0.5326 MDHFKGSESENPITTCLSLLSLRRFSDCRDFACGLPPTDIVARVLAIANILSSADFYSILQLHRSDCANRDLARRQYAKLALLLDPTNPDKFPFSDEALARVQEAWHVLSRPELRALYDREHPVPETATFWSACPYCWNLFEYEKMYEDCALLCQVCGKVFQGVPVKPPSMVGEAVLEGKELRQYYSCDASVPLRYYEVKEEIKSSNTFSEQNAASFVYISDDDDNEEFVTEGLQEYPKGLRRRRMRVKTVAKKGGIRRR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01236 260 Pfam DnaJ domain 55 119 IPR001623 -
Vian10g01236 260 Gene3D DnaJ domain 50 122 IPR036869 -
Vian10g01236 260 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 222 - -
Vian10g01236 260 SMART dnaj_3 54 114 IPR001623 -
Vian10g01236 260 CDD DnaJ 55 111 IPR001623 -
Vian10g01236 260 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Vian10g01236 260 SUPERFAMILY Chaperone J-domain 46 121 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01236 Vian-Chr10 20600956 20601738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01236 7 200 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.004 2.68e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01236 - - gsj:114406356 352.829