Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01174 ATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAATGCAGCCCTTAGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCACTTGAGACAGGAGAATTTGGTGAACTAGTAGACCCTAAGCTTCAACAACAATACATTGACAAAGAAATGTCGAAAATGATTGAGGCAGCAGCAGCATGTGTTCGCCACTCTGCTCTAAAGCGACCTCGTATGGTTCAGGTGCTAAGATCCTTAGACAACGGTGACCAACTATACGATCTTTCAAATGGGGTGAGATATGGTCAGAGCACTGTTTATAATTCTGGTCAATATAATGAAGACATTGCAAGATTCAGAAAGATGGTTAATGGAAGCTTTGATGATTCTGAGTTTGATAATCTCAGCTCAGAATTCCGTTCAACTGTTTCAAGAGAAATGGTTGAACTCAACTCTGCAAGCATATCACATAGTCCACGAAATAGTGATTCACAATTTAAAGTTTTCCACCACCAAAGGAGCCAAACCCAGAACAGGTCTTAA 624 0.4215 MGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPMQPLGEESLVEWARPLLLRALETGEFGELVDPKLQQQYIDKEMSKMIEAAAACVRHSALKRPRMVQVLRSLDNGDQLYDLSNGVRYGQSTVYNSGQYNEDIARFRKMVNGSFDDSEFDNLSSEFRSTVSREMVELNSASISHSPRNSDSQFKVFHHQRSQTQNRS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01174 207 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g01174 207 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
Vian10g01174 207 Pfam Protein tyrosine and serine/threonine kinase 5 112 IPR001245 GO:0004672|GO:0006468
Vian10g01174 207 MobiDBLite consensus disorder prediction 178 207 - -
Vian10g01174 207 SUPERFAMILY Protein kinase-like (PK-like) 1 113 IPR011009 -
Vian10g01174 207 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 169 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01174 Vian-Chr10 19312432 19313678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01174 1 157 Trihelix Transcription Factor Family AT1G70460 71.338 1.08e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vian10g01174 PK_Tyr_Ser-Thr 1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01174 - - vun:114173221 366.311