Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01160 ATGGATCTAGAAGGTGGAACTCGGCGATATTCTGCTAAGAGAGAGTCGTGGAGAACGGTTCTGACTCTGGCGTACCAGAGTCTGGGTGTAGTGTACGGTGATTTGAGCATTTCGCCGTTGTACGTTTTCAGAAGCACGTTTGCGGAGGACATTAAGCACACAGAGAGCAACGACGAGGTTTTCGGCGTTTTGTCGCTGGTGTTTTGGACTATAACGCTGATTCCTTTGGTGAAGTACGTGTTTGTTGTGCTGAAAGCTGATGATAACGGCGAGGGAGGCACGTTCGCGTTGTACTCGTTATTGTGCCGCCACGCGCGGGTGAGTTCGCTGCCGAATTGCCAGGTGGCGGACGAGGAGTTGTCGGAGTACAAGAAGGATTCGCGCGGCGCGGCTCCTGAGAGGAGCTTCGCGTTGCGGCTCAAAAGCACGTTTGAGAGGCACAGGGTTCTGCAGAGGGTTTTACTCGTTCTGGCTCTGATTGGGACTTGCATGGTCATTGGGGATGGCATCCTCACGCCGGCTATTTCTGTTTTCTCGGCTGTTTCTGGATTGGAGCTTTCAATGTCCAAGGAGACGCACGCATATGTTGAAGTTCCAGCTTCATGCATCATATTGATAGGGTTGTTTGCTCTTCAGCATTATGGCACGCACAGAGTTGGCTTCTTGTTTGCTCCTGTAATTATTGTGTGGCTTTTCTGCATTAGTACCATTGGAATATACAATATATTTCACTGGAATCCCCATGTATACAAAGCACTCTCTCCATATTATGCTTTCCAACTCTTGAGGAAAACTCAAAAGGGAGGTTGGATGGCCCTTGGTGGAATTTTACTGTGCATCACAGGAGCAGAAGCCATGTTTGCTGATCTTGGGCACTTTAGCCAATTATCAATCAAGATTGCTTTTACATCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATGACATTGAGCAAGATTATCACTTTGGGTTTTACGTATCTGTACCAGAGAAATTGAGATGGCCTGTTCTGGTTATAGCCATACTAGCTGCAGTTGTTGGTAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAGTGCTCTGCATTAAGTTGTTTCCCGAGAGTGAAAGTGATTCACACATCATCAAAAATTCATGGGCAAATATATATCCCTGAGGTCAATTGGGTATTGATGATATTGTGCTTGGCAGTAACTGTTTGTTTCAGAGACACAAAGCGCCTGGGTAATGCCTCAGGTTTGGCAGTAATCACAGTGATGCTGGTGACCACCTGTTTGATGTCACTGGTTATTGTTCTATGCTGGCACCAGAATGTCCTCCTTGCACTTGGGTTTGTTTTCGTATTTGGCACCATTGAGGCTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTATAGCGTTGGCTCTTGTATTTCTGACTTTCATGTATGTCTGGCACTACGGCACACTAAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCATCAACTGGCTTCTCGGCCTAGGTCCCAGCATAGGCATAGTCCGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTTTCTGGAATTCCAGTAATCTTCTCCCACTTTGTAACCAACCTCCCAGCCTTCCATGAAGTCCTAGTTTTCCTCTGCATCAAACACGTGCCAGTTCCACATGTTAGACCTGATGAACGGTTTCTGGTTGGCCGCGTTGGTCCAAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGATGATGTTGAGTTTGAGAATGATCTTTTGTGCAGCATAGCAGAGTTCATTCGCACAGAAAAAACCGGATTGAACTCTTCAAATGATGAGCCTGGAAAGGATGACAGAATGGCAGTTGTTGGAACTTGTTCTACTCATTCCCTTTTGATGAGTGAGGACAATGTAGAGAATGTTGAGAATGTAGAGAATGCAGGGCCATCAGAACTGAAGGAGATAAAGTCACCAAATGTTATAAAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCTGAGAGTCCAAAGATTAACACAGATGCAAAGAAAGAGTTGGAGGAGGTTATGGAAGCAAGGGAAGGTGGGGTAGCTTACATTATAGGACAGACACACTTGAGAGCAAAACCAGGGTCTAGCATGGTGAAAAAAATAGCCATTAATATAGTGTATGAATTCCTAAGAAGAAATAGCAGGTCACCCTCCTTTGTCACTGGTGTGCCTCATGCATCATCTCTTGAAGTTGGGATGATGTATCAAGTTTAA 2340 0.4521 MDLEGGTRRYSAKRESWRTVLTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNDEVFGVLSLVFWTITLIPLVKYVFVVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYKKDSRGAAPERSFALRLKSTFERHRVLQRVLLVLALIGTCMVIGDGILTPAISVFSAVSGLELSMSKETHAYVEVPASCIILIGLFALQHYGTHRVGFLFAPVIIVWLFCISTIGIYNIFHWNPHVYKALSPYYAFQLLRKTQKGGWMALGGILLCITGAEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLSKHHDIEQDYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEVNWVLMILCLAVTVCFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFVFGTIEALFFSASLIKFLQGAWVPIALALVFLTFMYVWHYGTLKKYEYDVQNKVSINWLLGLGPSIGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHEVLVFLCIKHVPVPHVRPDERFLVGRVGPKEFRLYRCIVRYGYRDVHKDDVEFENDLLCSIAEFIRTEKTGLNSSNDEPGKDDRMAVVGTCSTHSLLMSEDNVENVENVENAGPSELKEIKSPNVIKQQKKRVRFLVPESPKINTDAKKELEEVMEAREGGVAYIIGQTHLRAKPGSSMVKKIAINIVYEFLRRNSRSPSFVTGVPHASSLEVGMMYQV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01160 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian10g01160 779 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian10g01160 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01160 Vian-Chr10 19035081 19040010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01160 1 779 Inorganic Solute Cotransporters AT1G70300 74.202 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01160 K03549 - gmx:100793141 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01160 10 19035081 19040010 Vian10g01160 10 19035081 19040010 ECH