Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01154 ATGGAGGAACATCTCACTCCACTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCCCAATGGGTCTATGCAGTCTTCTGGAGGATCTTGCCAAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCATATGATAGATCAAGAGGAAACAGAAGGAATTGGATACTGGTGTGGGAAGATGGTTTCTGCAATTTTGCTGCATCGGCAGCTCCTGAAATCAACTCTGGAGATTGTCCCACCTCGTCCGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGACTGCAACCGGAACTCTTCTTCAAGATGTCCCATGAGATCTACAACTATGGAGAAGGGTTAATAGGAAAAGTTGCTGCAGATCACAGCCACAAGTGGATATACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCTCTTATTGCTGTGAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACCTGAGCTATGTTGTTCTTCTAAGAAAAAAGTTCAGCTACATTGAAAGCATCCCTGGTGTGCTGTTGCCACATCCATCATCTTCTGCATACCCTTATAAAGTAGAAGGAGGGTATGGAGTTCCAGAACAATGGCATTTTCAAGGGAACCATCTTGCACCTCAAGCTGAGTTATATGAGAACCACTTCAACTTGCCACTGAAGATAACTCCCTCAATGAGCAGCCTGGAAGCACTTCTGTCAAAGCTGCCCTCAGTGGTGCCACCACCACATCCTACACAACCATCACAGTCCCATCATCATCAACTTCTGGCATCACCCCAGCAAAGGCCACTGGAGTTCATGGGATCAATGCAGAAAGTGGCAAAAGAAGAGTTAGAAGAAGAGGTATACAGACCAGAACTTGACATTGGTGAGAGCAGCACTTCCATGTCAGGCTACCACCATCAACATCACTTCCATCAAGATCAGAATAATGTAACTAGGAGTGGAGCCAACGATGGATTTTGA 1089 0.4573 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGDCPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGGYGVPEQWHFQGNHLAPQAELYENHFNLPLKITPSMSSLEALLSKLPSVVPPPHPTQPSQSHHHQLLASPQQRPLEFMGSMQKVAKEELEEEVYRPELDIGESSTSMSGYHHQHHFHQDQNNVTRSGANDGF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01154 362 MobiDBLite consensus disorder prediction 278 298 - -
Vian10g01154 362 MobiDBLite consensus disorder prediction 331 362 - -
Vian10g01154 362 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 231 - -
Vian10g01154 362 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01154 Vian-Chr10 18906828 18908752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01154 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.771 2.87e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01154 - - vun:114173114 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01154 10 18906828 18908752 Vian10g01154 10 18906828 18908752 ECH