Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01153 ATGGTGGGTGTAGGATTAGGTGTAACAGCAGCAATGATTGCAACTCAGTTCTTGGAAGTGGGTCTCAACACTCTAATCAAAGAAGCAAACACCAATGGAATGAGTAATTTTGTCTTCATTGTCTATTCAAACTTTTTCGCTCTCTTCATCCTCTTACCATCAACCTTCTTCTACCACAGGAAGACACCTCCTCCTCCAATCCCAAGATCAATTCTCTGTAAAATGTTTACTATTAGCTGCCTCAGCACTGTAGTGCAGACGTTGATGTACACCGGAATCTCATACAGCTCTCCTACACTATGTTCTGCTATGGTTGACCTTGTTCCTGCTTTTACCTTCATATTTGCCCTTATTTCAAGGATGGAAAATCTGAATCTGAAACAGCATAGCTGCCAGGCAAAAGTTATTGGTACAGTGGTCTCCATTGCAGGGGCATTCATAGTCACTCTATATAAAGGAACGCCATTGAATTTCAATTCGTTGAGAAACTTAGGTGAAAATGGAACTTACCTTTCAATGCAATCAGATTGGATCGTTGGTGGTTTTCTTCTTGCAATTGCTAGTCTCTGCATTTCAGTTTTGCTTATTGTTCAGACTTCAGCTGTGAAGGAATATCCTGAAGAGTTAGTGATAACAACCATTTGTTGCAGCATGGTGGTCATCCTCTCTGCCATAGTTGCTGTCTTTGCAGAGGGAAATCCTAAAGCTTGGATACTGACATCTCAGAGAGAGTTCATAGCTGTATTTTATTCAGCAATATTTGTTGTATCAATGAGAAGTGTTGTGTGCACATGGGGATGCCGAAAGAAGGGAGCAGTTTATGTAGCAATGTTTAACCCTTTGGGAATGGTGATTGCACTTGGTATGGGGGTGATATTTCTGGGAGAGAGTCTTTACCTTGGAAGTGTGATTGGAGCGGCGATAATAGGTATTGGATTTTATTTGGTGCTGTGGGCACATGCTGAAGACAGTAATGTGGCAAAGGAGAATAACGAGAACCGTGATCTTGTGAGTTCCTCTGCAGCTCCTCTGTTGTCCACTAAAAGCATCGATGTACTGTGA 1062 0.4181 MVGVGLGVTAAMIATQFLEVGLNTLIKEANTNGMSNFVFIVYSNFFALFILLPSTFFYHRKTPPPPIPRSILCKMFTISCLSTVVQTLMYTGISYSSPTLCSAMVDLVPAFTFIFALISRMENLNLKQHSCQAKVIGTVVSIAGAFIVTLYKGTPLNFNSLRNLGENGTYLSMQSDWIVGGFLLAIASLCISVLLIVQTSAVKEYPEELVITTICCSMVVILSAIVAVFAEGNPKAWILTSQREFIAVFYSAIFVVSMRSVVCTWGCRKKGAVYVAMFNPLGMVIALGMGVIFLGESLYLGSVIGAAIIGIGFYLVLWAHAEDSNVAKENNENRDLVSSSAAPLLSTKSIDVL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01153 353 PANTHER WAT1-RELATED PROTEIN 9 328 IPR030184 GO:0016020|GO:0022857
Vian10g01153 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 320 - -
Vian10g01153 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Vian10g01153 353 Pfam EamA-like transporter family 181 317 IPR000620 GO:0016020
Vian10g01153 353 Pfam EamA-like transporter family 7 149 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01153 Vian-Chr10 18870998 18873558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01153 11 351 Nodulin-like Gene Family AT3G28050 42.179 2.01e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01153 - - vun:114173029 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01153 10 18870998 18873558 Vian10g01153 10 18870998 18873558 ECH
Vian10g01153 10 18870998 18873558 Vian2g01406 2 28966322 28973661 ECH