Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01150 ATGGTGTCCACATTCCATAGTCACGTGGTCATATTCTACACTGAGGGAGAGAATACGGAAAACAACATAACAGACATTGAAGAGATAGAAAGGGAGAGAGAGCAGAGAGACAAAAGTAATGCCGAGCGGAGACGTAACGACGGTGATGATTACGGCAGTGTTTTTATCTGTGGGTTTGAACACTCTGGTGAAAGCAAACCTGTGTCCAGTGGCATGAGCAATTTCGTTTTCGTTGCTTATTCCAACCTCTTCGGATTCTGTTTCCTGCTAACCGCAACAACCCTTCGTTACAGAAACAGATCTCCCCCACCGCTCAATAACTCCATTGTCTTCAGAGCTTTTCTCCTTGGCTTCTTGGGTGTTTTCATTCAAACGCTCTTTTATATTGGCCTTGGATATGGCTCCCCCACTCTCAGCTCAGCCACAGAAGATCTCATTCCAGCTTTCACTTTCATAATCGCCGTTGTTTTCAGGATGGAAAAGCTGGACCTAAAACTAAGAAGCAGTCAAGCAAAAACCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAACGGTGACTTTATACAAAGGTAAATAG 579 0.4456 MVSTFHSHVVIFYTEGENTENNITDIEEIEREREQRDKSNAERRRNDGDDYGSVFICGFEHSGESKPVSSGMSNFVFVAYSNLFGFCFLLTATTLRYRNRSPPPLNNSIVFRAFLLGFLGVFIQTLFYIGLGYGSPTLSSATEDLIPAFTFIIAVVFRMEKLDLKLRSSQAKTIGTVVSIAGALTVTLYKGK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01150 192 PANTHER WAT1-RELATED PROTEIN 69 191 IPR030184 GO:0016020|GO:0022857
Vian10g01150 192 Pfam EamA-like transporter family 66 187 IPR000620 GO:0016020
Vian10g01150 192 SUPERFAMILY Multidrug resistance efflux transporter EmrE 82 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01150 Vian-Chr10 18778972 18782496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01150 71 191 Nodulin-like Gene Family AT3G28050 50.407 1.24e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01150 - - vum:124822465 239.965