Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01149 ATGAGTCTTTTGATGCAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATTCTAATTAGCATTGCTACCAGTTTCTCTTTATTCCTATCTTTCGTAGTTGCTTTCATTGCAGAGAAAAATCCCAAGGCATGGATACTTAAGCCTGATATGGAACTGGTGTGCATATTGTGTACAGCCATTATAACAGTATGTACACGAGGTGTGGTTGATGCATGGGCATGTAGAAAGATGGGAGCTGTATATGTTGCTATGTTCAGTCCTTTAGGAATTGTGTTTGCACTTGTTATGGGGATTATATTTCTGGGAGACACTCTTTATCTTGGAAGTGTGATAGGTTGTGCTGTAATAGCTATCGGATTTTATGCTGTATTATGGGGTCAGGCTCAAGAGGAAAATAAGACTAGTCAAAAAGATGGAGCCTATGGCATTATCCCTTCATCTGAAACCACCCTCTTACTGCATACAAGCAAAGACACAATGATAACATAA 492 0.3963 MSLLMQTWTIKDYPEELILISIATSFSLFLSFVVAFIAEKNPKAWILKPDMELVCILCTAIITVCTRGVVDAWACRKMGAVYVAMFSPLGIVFALVMGIIFLGDTLYLGSVIGCAVIAIGFYAVLWGQAQEENKTSQKDGAYGIIPSSETTLLLHTSKDTMIT 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01149 163 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 129 - -
Vian10g01149 163 Pfam EamA-like transporter family 19 125 IPR000620 GO:0016020
Vian10g01149 163 PANTHER WAT1-RELATED PROTEIN 2 136 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01149 Vian-Chr10 18770000 18770683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01149 4 159 Nodulin-like Gene Family AT3G28050 36.905 8.81e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01149 - - vum:124830837 311.227