Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01148 ATGACAAGATTGGGGAATGGAACTGGAAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGCAGCATGGTGGTAATCAAAGTTGCCATGATTGATGATATCAACAAATATGTCATGGTTGTCTACTCTTTTGCACTCTCCACAATCTTGCTTCTTCCCTTTGCCTTGTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTGCACTCTGCAGCTTCTTTCTGCTTGCATTCTTTGGGAGTTCAGGAACTATAATGGCTTATGTTGGAATTGAACTGAGCTCGCCGACACTTGCCTCAGCCCTTCTTAACCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACGGTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAGTAGCATCAATTGCAGGAGCATTTGTTGTGATACTCTACAAGGGTCCTCTCATCTTTAAGACGCATTCGACTAACTTTTCTAACCAAATCCTTCAATTTTCAGCACAGCTAAATTGGATCTTAGGAGGGATATTCTGCATTGCAGATTCACTTTTTACTTCCATGTGGTACATATATCAGGCTTCGGTAGCAAAGAAATACCCTGCTGTAACAGTGATTGTATTCTTCCAACTCTTATCTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCGACTGAATGGAAGCTCAACTTGGATATAGGGCTGATTGGCGTTCTATATCAGGTGGAAAATGAAAACCAACGAGATGAAACTGAAACACTGAAATACATTTACATTTGTGTTTTTGCTTTAACTTTTATAAATGATTAA 852 0.412 MTRLGNGTGKLLPFVGMMVAMLTQSGSMVVIKVAMIDDINKYVMVVYSFALSTILLLPFALFLHRSERPPLTFSALCSFFLLAFFGSSGTIMAYVGIELSSPTLASALLNLVPAFTFILALIFRMEEVRWRNSSSQAKVLGTVASIAGAFVVILYKGPLIFKTHSTNFSNQILQFSAQLNWILGGIFCIADSLFTSMWYIYQASVAKKYPAVTVIVFFQLLSSTVQCGVFALIAVRDPTEWKLNLDIGLIGVLYQVENENQRDETETLKYIYICVFALTFIND 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01148 283 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Vian10g01148 283 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Vian10g01148 283 PANTHER WAT1-RELATED PROTEIN 13 255 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01148 Vian-Chr10 18739817 18741203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01148 8 255 Nodulin-like Gene Family AT5G40240 40.000 9.62e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01148 - - gmx:100792109 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01148 10 18739817 18741203 Vian10g01148 10 18739817 18741203 ECH
Vian10g01148 10 18739817 18741203 Vian1g00707 1 7211473 7213562 ECH