Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01147 ATGACGAGATCAGCGACTGGAACTGGCAAACTACTGCCATTTATAGGAATGATGGTGGCTATGCTGGGTCAAAGTGGCAGCATGGTGGTGATCAAGGTTGCTATTAAGGATATCAATGAATATGTCATGGTTGTCTACACTTTTGCACTCTCTGCTATCTTGGTTCTTCCCTTTGCCGTGTTTCTCCACAGGAGGTCACAAAGTCCTCCTATCAATTTCGTTGCACTTTGCAGATTCTTTTTGCTCGCTTCCTTTGGGAGTTTAGGAACTATACAGGCTTATGTTGGCATAGATCTGAGCTCGCCTGCACTGTTATCAGCTATTCTTAACCTCATGCCAGCTTTCACTTTTATACTTGCTCTCATCTTCAAAACTAAATTGGATCTTGGGAGGGATAATGTGTGTTCTCGATGCACTCTTTACTTCCTTGTGGCTTCAGTAGGAGACACGTACCCTACTATGGATGTCTCGGTCATTGTATTCTTCCAATTCTTATTTTCAATGCTGCAGTGTGGAGCATATGCTTTCTTTGCTGTGAAGGATTTATCCGAATGGAAACTCAAGGTGGATATAGGGTTGATCGGCATTCTGTATCAGACAATAATTGCAACATTGCTGCGTTACCTCCTCGTCATGTGGTGCATAGTTAAAGCGGGCCCTTTGTTTTGTGCTTTGTTTCAACCTGTGGCAATCATTTTCACAGTTTGGATGGGTGCAATCTTTCTTGGAGACGATTTCAGTCTCGGAAGTTTGGTTGGTGCGGCTATAATCGTGATCGGATTTTATGCTGTTCAGTGGGGAAAATCGAAAGAGGAGTACGAGATTGCGAAAGGCGTTGAGCACTTGGACACGGAATCACTGAGCCATGGTGTTCCTTTATTGGCAGATAGGAACACGTAG 900 0.4389 MTRSATGTGKLLPFIGMMVAMLGQSGSMVVIKVAIKDINEYVMVVYTFALSAILVLPFAVFLHRRSQSPPINFVALCRFFLLASFGSLGTIQAYVGIDLSSPALLSAILNLMPAFTFILALIFKTKLDLGRDNVCSRCTLYFLVASVGDTYPTMDVSVIVFFQFLFSMLQCGAYAFFAVKDLSEWKLKVDIGLIGILYQTIIATLLRYLLVMWCIVKAGPLFCALFQPVAIIFTVWMGAIFLGDDFSLGSLVGAAIIVIGFYAVQWGKSKEEYEIAKGVEHLDTESLSHGVPLLADRNT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01147 299 Pfam EamA-like transporter family 151 263 IPR000620 GO:0016020
Vian10g01147 299 Pfam EamA-like transporter family 15 128 IPR000620 GO:0016020
Vian10g01147 299 SUPERFAMILY Multidrug resistance efflux transporter EmrE 189 270 - -
Vian10g01147 299 PANTHER WAT1-RELATED PROTEIN 13 131 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01147 Vian-Chr10 18680320 18682819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01147 25 288 Nodulin-like Gene Family AT3G18200 29.630 3.65e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01147 - - gmx:100816194 335.109