Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01120 ATGTTCAATTTTAGTTCTGGTCTATGGCATTATATATGTCATGCAACCCACATGGAGGAAGAAGATGTGCCTAAAGCCCAGAAGGCACGAAACTGTTGTTTACTACATGAGGAAAGAATGGATCAGATTGACAAAATAAGGGTCATGGCCAGATCATCTCCATTTGACGAGCTTCTGATGGTTCAATGTTTAAAGCAGAAGGGTAAGGTGGTGCCAATCACAAGTGATGCCACAAATGACGCACCTGCTCTAAAAGAAGTACATATTGGACTCTCCAAGGGAATAGAAGGCACTGAAGTGGAAAAGGACAGCTTTGGCTCTAGCCATAGAGGAACCTACTAA 342 0.4269 MFNFSSGLWHYICHATHMEEEDVPKAQKARNCCLLHEERMDQIDKIRVMARSSPFDELLMVQCLKQKGKVVPITSDATNDAPALKEVHIGLSKGIEGTEVEKDSFGSSHRGTY 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01120 113 PANTHER CATION TRANSPORTING ATPASE 16 104 - -
Vian10g01120 113 Gene3D - 34 103 IPR023214 -
Vian10g01120 113 SUPERFAMILY HAD-like 34 102 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01120 Vian-Chr10 16770792 16774241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01120 17 104 Primary Pumps ATPases AT3G22910 59.091 1.12e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01120 K01537 - gmx:100784119 115.931