Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian10g01076 | ATGGAACTTTTCCCAGCTCAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACGCCAAACCAACATCAACTTGGAGGAGAAGCACAGAAGAAGACATGGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCAAGAAACTCCATATCATCAATGGCCAAACAAGACTCTTGCGTCGCCCTCTCCCTCTCCAATCCAAAAGCCTCGTCCGATAACTCCAACTCCTCTAACCTCATTCACCGCTTCCAACACGGTGCCAATAATGCCACCACCAACCCCTTCCAACCCTTTCAGCAGAACCATTACTTCCACCAGCCACTGTTCCAGCCTCAGCACCAAAGCCTCAGCCAAGACCTCGGCTTTCTCAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACTCAGCATCACCACCACCACCACCATCTCCCTCTGGAGCCTTCAACCACCGCCCCTTCTTCTATTATTTCCAGCACCAACACTGCTTCTACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCCAGGATGCGTTGGACTTCTACCCTCCATGCTCGCTTTGTCCATGCCGTTGAACTCTTAGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTGAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCTGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGGTCGTCGGGAGATACTTCTGATGACTTAATGTTTGATATAAAATCTTCTCGAAGGTCTGATGTATCCATTAAACAGGGAAGATCAAGTGTTAATCAAGATAAGGATTGTCATGGTCTTTGGGGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGACTGATTCTGTTGGAAACGTGCCATCTCTTGAGAAGGAAATGGATCCGAAGTGTGTGAGTTATGAGAGAATATCAGATGGAAGCTCATCTTCAAATGTGTCAGGATCAAGCCCGAAGAAGGCTAATTTGGATTTGGAATTCAGCTTGGGGCAGCCACTTTAA | 1125 | 0.4791 | MELFPAQPDLSLQISPPNAKPTSTWRRSTEEDMDLGFWKRALDSRNSISSMAKQDSCVALSLSNPKASSDNSNSSNLIHRFQHGANNATTNPFQPFQQNHYFHQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHHHHHLPLEPSTTAPSSIISSTNTASTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDVSIKQGRSSVNQDKDCHGLWGNSSREAWLHGKTKTDSVGNVPSLEKEMDPKCVSYERISDGSSSSNVSGSSPKKANLDLEFSLGQPL | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 252 | 277 | - | - | |
Vian10g01076 | 374 | Gene3D | - | 193 | 250 | - | - | |
Vian10g01076 | 374 | SUPERFAMILY | Homeodomain-like | 191 | 247 | IPR009057 | - | |
Vian10g01076 | 374 | FunFam | Myb family transcription factor | 192 | 250 | - | - | |
Vian10g01076 | 374 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 194 | 247 | IPR006447 | GO:0003677 | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 342 | 374 | - | - | |
Vian10g01076 | 374 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 8 | 373 | IPR044847 | GO:0000976|GO:0006355|GO:0010158 | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 152 | 166 | - | - | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 344 | 362 | - | - | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 137 | 166 | - | - | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 318 | 337 | - | - | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 252 | 276 | - | - | |
Vian10g01076 | 374 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian10g01076 | Vian-Chr10 | 12340964 | 12345379 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian10g01076 | 1 | 373 | G2-like Transcription Factor Family | AT4G17695 | 38.520 | 1.30e-62 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Vian10g01076 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian10g01076 | - | - | gmx:100798081 | 617.076 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian10g01076 | 10 | 12340964 | 12345379 | Vian10g01076 | 10 | 12340964 | 12345379 | ECH |