Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01064 ATGGCACCACCAATAACGGACTCGGAACCAGAATCCGAAGCGCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGCCTCCAACAACGCCAAATCCGCTCTCAAATACGCGAAGCGTGCGCAGCGTCTGTGCCCGCACCTCGATGGCGTGTCGGAGGCCGTCACTTCGCTCACTGTCCTCGCCGCGTCGGACTGGTATAGTGCGCTCGGTGCTGAGCCCTTTGCAAACAGCAGCGTCATTCGGAGACAGTACAAGAAGCTCGCACTGCTCCTCCATCCCGACACGAACCCCAACGTGGCGTCCGAGGAGGCCTTCAAGCTCGTCGGCGAGGCCTTCCACCTTCTTTCCGACCGGAGTCGCCGCCGAGAGTACGATGCCGAGCTCCGACAGAAGATCAAGGCGGAGAGCGAGACGTTCTGGACCGCCTGCTCCACTTGCAGGCTCCTTCACCAGTTTCAGAGAAAGTATATGGGTCAAGAATTGGTGTGCCCGAGTTGTGAGAAGAGTTTTACGGCTGTGGAAACGGTTCAGAGTGATGGGGATGGTGATGGGGAAGGTAGGGTTAGGAGTATGAGGTTGAAGTTGAAAGAGATAAATAAGAAGAAGGAGAAAATTGGTGTGAGAGGGAAAGTGGATAATGAAGTGGGGGATGAGAAGGAAGGGAAATTGAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCCAAACCTATTAAAAGGGTTAAAAATGGGGAGGAAATGATGACATTAGCTGAATTTCAGACTGAGGTGAGGAGAAAGTTGCAGGAAAAAAAGTTGAAGGAAAAAGAAAAGGAAAAGGAGGATGATAGAATTGAGAAGAGGAGCAATCGGGTGGAGAGGCGGCGGGCATTGAAAAACTCTGAAGGTTTAGAGGTTGGAGAGGGGAGGGCTTTGAGGAAGAGTGTGAGGCTTGGGATTGAGGAGAATCTTGTGGGTTTATCGAAGAGAAAGGGATTGAGATCTGCGAGGCATAAGGATTCTGATAAAGGGGGGTTGGAAAACATGGCGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAAGAGTTTTAAGAAAGGTCAAGTGTGGGCAGTCTATGACGATGATGATGGAATGCCGAGGAATTATGCCCTGATTGATGAAACTCTTTCACTGAATCCTTTTGAAGTGAGATTAAGTTGGTTGGATGTACAGATCAGTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATGGGGTTTCATACACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCGGTGAATTCGGTAAATATATTTTCCCATGTTGTGGATTGTGACCGGGCAGCACGTGAACTTTACAAAATTTACCCCAAGAAAGGCTCAGTATGGGCGCTGCATGGCGAGGGAAGTATTGATGCAGAGGACCGCAAGAGATGCTATGACATTGTTGTATGTCTGACAAGTTACAATGAGGCAAATGGTCTGAGCATGGCGTATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAGGCGGCAAAAGAAGGGGAGTAGTGCTATTATATTTCTTGGGAAGGATGACATGTGCTTAGTTTCTCATCAAATTCCAGCACGGAAGCTTATTTGTGATGAAACCCCTGAACTGTTGAAAGACTGTTGGGAACTTGATCCCGCATCACTTCCTTCAAATTTACTTACTATTGGCGGCATTGCTAATTGA 1725 0.4835 MAPPITDSEPESEALRLKAMAESKFKASNNAKSALKYAKRAQRLCPHLDGVSEAVTSLTVLAASDWYSALGAEPFANSSVIRRQYKKLALLLHPDTNPNVASEEAFKLVGEAFHLLSDRSRRREYDAELRQKIKAESETFWTACSTCRLLHQFQRKYMGQELVCPSCEKSFTAVETVQSDGDGDGEGRVRSMRLKLKEINKKKEKIGVRGKVDNEVGDEKEGKLRKRMRSVGEVLERSKPIKRVKNGEEMMTLAEFQTEVRRKLQEKKLKEKEKEKEDDRIEKRSNRVERRRALKNSEGLEVGEGRALRKSVRLGIEENLVGLSKRKGLRSARHKDSDKGGLENMAVVDSDFYDFDKDRVEKSFKKGQVWAVYDDDDGMPRNYALIDETLSLNPFEVRLSWLDVQISGDGRIVSREKMGFHTPCGRFKVARKTSVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALHGEGSIDAEDRKRCYDIVVCLTSYNEANGLSMAYLEKVDGYKTVFRRQKKGSSAIIFLGKDDMCLVSHQIPARKLICDETPELLKDCWELDPASLPSNLLTIGGIAN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01064 574 SUPERFAMILY Chaperone J-domain 58 130 IPR036869 -
Vian10g01064 574 CDD DnaJ 65 118 IPR001623 -
Vian10g01064 574 Pfam Domain of unknown function (DUF3444) 344 543 IPR024593 -
Vian10g01064 574 SMART dnaj_3 64 121 IPR001623 -
Vian10g01064 574 Coils Coil 253 284 - -
Vian10g01064 574 Gene3D DnaJ domain 52 147 IPR036869 -
Vian10g01064 574 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Vian10g01064 574 PRINTS DnaJ domain signature 67 85 IPR001623 -
Vian10g01064 574 PRINTS DnaJ domain signature 85 100 IPR001623 -
Vian10g01064 574 PRINTS DnaJ domain signature 101 121 IPR001623 -
Vian10g01064 574 PANTHER BNAC03G44070D PROTEIN 11 563 - -
Vian10g01064 574 Pfam DnaJ domain 65 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01064 Vian-Chr10 12080126 12081850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01064 5 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.244 6.90e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01064 - - ccaj:109800659 850.506