Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01063 ATGGGCAGTAGTGAGATGGATAAAGCTCCAAAAGAGAAGGAGTCAAAGACGCCACCACCTATGTCACAGGAGCAGTCTTCAACCACCGCTACTGGAACAATTAATCCTGATTGGCCTGGATTTCAGGCATATTCTCCTATACCTCCACACAGTTTCTTGGCATCAAGTCCACAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCCTATGGTACTCCACCACATCCATATGTTGCAATGTATCCACCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCCTTTGCTATGCCTTCTCCAAATGGCATTGCTGAGGCTTCAGGAAACACTCCTGGAAGCATGGAAGCCGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAGTAATGAACATGGTAAAACAACGGGAACATCTGCTAATGGAAATCATTCAAAGAGTGGTGATAGTGCAAGTGAAGGCGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAAAATGACTCTCAATTGAAATCAGGGGGCAGACAGGATTCTTTTGAAGATGAACCATCTCAAAATGGCACTTCAGCATATACTCCTCAAAATGGGGGCCTAAGTGCACCTCCTACTGCGGTCAATCAAACTCTGCCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCAGCTTCTTCCAACATTCCTGCACTTGCTAGAAAGGTTCCATCTACTGCAGTTGTTGGATCACGGGATAGTGTTCAATCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGAAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGTAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGAGGCTTTGAAGGAAGAAAATGCTTCTCTCCGGTCAGAAGTTAGCCGAATCAGGAGCGATTATGAGCAACTGCTCTCCGAGAACACTGCTCTCAAGGAAAGACTAGGGGAATTACCTGCAAATGATGATCATCAAAGGTCTGGGAGGAGTGATCAACATGTGGGTAATGATGCTCAACAGAATGGGCAGACAGAGGCTGTGCAGGGTGGTCACTAG 1221 0.4636 MGSSEMDKAPKEKESKTPPPMSQEQSSTTATGTINPDWPGFQAYSPIPPHSFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKSNEHGKTTGTSANGNHSKSGDSASEGEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGTSAYTPQNGGLSAPPTAVNQTLPIIPISAGGAPGAVPGPTTNLNIGMDYWGTPASSNIPALARKVPSTAVVGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSDYEQLLSENTALKERLGELPANDDHQRSGRSDQHVGNDAQQNGQTEAVQGGH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01063 406 MobiDBLite consensus disorder prediction 387 406 - -
Vian10g01063 406 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Vian10g01063 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 395 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vian10g01063 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Vian10g01063 406 MobiDBLite consensus disorder prediction 303 326 - -
Vian10g01063 406 MobiDBLite consensus disorder prediction 1 46 - -
Vian10g01063 406 MobiDBLite consensus disorder prediction 365 406 - -
Vian10g01063 406 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
Vian10g01063 406 MobiDBLite consensus disorder prediction 19 38 - -
Vian10g01063 406 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Vian10g01063 406 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Vian10g01063 406 Pfam Disordered region downstream of MFMR 135 274 - -
Vian10g01063 406 Coils Coil 321 369 - -
Vian10g01063 406 MobiDBLite consensus disorder prediction 371 386 - -
Vian10g01063 406 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Vian10g01063 406 MobiDBLite consensus disorder prediction 1 18 - -
Vian10g01063 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Vian10g01063 406 Gene3D - 304 358 - -
Vian10g01063 406 MobiDBLite consensus disorder prediction 111 233 - -
Vian10g01063 406 MobiDBLite consensus disorder prediction 146 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01063 Vian-Chr10 12058708 12074655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01063 1 380 bZIP Transcription Factor Family AT2G35530 63.224 2.57e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian10g01063 MFMR_assoc 2.3e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01063 K09060 - gmx:778122 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01063 10 12058708 12074655 Vian10g01063 10 12058708 12074655 ECH