Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01014 ATGAGCGTTCCTCCGCCGTCCACGGCGGCGATGTGGACGCCGTTCACGGCGGCCCAGTGGCACGAGCTGGAGCACCAGGCTCTCATCTTCAAGTACCTCAAGGCGGGGCTCTCCGTTCCGCCCGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTCATGGCACACCCATCTCTTGGGGGGTACTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCTCATCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGCCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCTTCTGCTTCTTCAAACCCTGTTGCTGCTTCTGCTTCTGCTGCTTCCTCTGCAACGGGTTCTGCTACATCTTCTGCAACTGGTTCTGCTGCTGCATCTGCGACAACCCTCAACACCCTTCCTTTGCATACCAATGGTGCTCGGGAGGGTTTCACTTTCACCCTTGGGAACAGCGCCACCACTGCCACCCCCACACTCCCCCACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAACACCAAGAAAACTTACCGGTATGTATGCCCATTCGCCTCTTTCAGATTGAGCCCTTTGGTAGGGTATTGTGTGTATGTACATTTGTCTTTAAGGGTGTTTGACTTTTGGGGTTGTGGTAATGATTGCTGTGATTTTCTAGTGGAGTGTGTGGGTGTTTTACTTCACGTTAATGCAATGGTAAAAGATAGAATCAGGGGGCATCTAAATTGCCCTGTGCAGAGTATGTTTGGACTGAACTCAGAAGCAGATGAACACGTCTTACAGAAAGATCTGGGAAGTGTGAGATATCAAGGTTATGACTTCACCTCAGACAGCATGTGGTCTCATATGTCTCCAATTCCATCAAGTACTGTTTCGGAATCGAGAAGTGGTTCTACCATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCCGAGCTGTTGAACCTTGAAACTGCAAGGACCAAAGACCTTATATTTAGTAGCCAGTTAAGTTCAGCAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCCATCGAGTATAGACCCAACAAGGATTTTAACTGCAATCCAGATGCCAATGTTGATTAA 1212 0.4992 MSVPPPSTAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMAHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSASSNPVAASASAASSATGSATSSATGSAAASATTLNTLPLHTNGAREGFTFTLGNSATTATPTLPHLHMDPLTLSGDNTKKTYRYVCPFASFRLSPLVGYCVYVHLSLRVFDFWGCGNDCCDFLVECVGVLLHVNAMVKDRIRGHLNCPVQSMFGLNSEADEHVLQKDLGSVRYQGYDFTSDSMWSHMSPIPSSTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLIFSSQLSSAGSLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPNKDFNCNPDANVD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01014 403 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian10g01014 403 MobiDBLite consensus disorder prediction 68 124 - -
Vian10g01014 403 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian10g01014 403 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vian10g01014 403 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Vian10g01014 403 Pfam WRC 69 111 IPR014977 -
Vian10g01014 403 PANTHER GROWTH-REGULATING FACTOR 5 13 375 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vian10g01014 403 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01014 Vian-Chr10 11132897 11135902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01014 14 111 GRF Transcription Factor Family AT3G13960 59.633 1.02e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vian10g01014 WRC 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01014 - - gmx:100809947 303.523