Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01013 ATGGCTTCTTCAAGCTCTCTCTTGAGGATGGAAGAAATAGCAGGGAAAGGAAGAGGTCTTGTTGCAGCAAAATCCCTAAAAGCAGGTCAAATAATTCTCACTGAATCCCCTCTCATTCTCTACTCAGCTTCTCCTCTCTATGCACCATCTTCTTCACCTTTCACCAACTGTGATCACTGCTTCAGAATCTTATCCTCTCACACAACCATTTTCCGATGCCCCTCTTGCTCCCACCACACTTTCTGCTCCCAAAGCTGTCTCTCATTTGCACAAAACTCCTCACACTCCAATTGGGTATGCAAAGCTCTCACCTTTCTTCTTCAACACCCCAACTCAACACTCTTTCAACAACACCCTCCAGAACGCCAAGTTCAAGCTCGTTTCGTTGTAGCTTCTCACAACCTCTTCCTCCACTCCCCTTCTCAACTTCACACTTTCCTCTCTCTTCATGGCACTCCAGATACTGCCATTTATGATGTTGCCAAGTTTCTCCATTCTCTAATCTCACCTCTTTTCCCACCCGAGGGTCAACTTTCTGTAGATCTCACTGCACAACTTCTTGCAAAGGACAGACTCAACTCCTTCTGCTTAATGGACCCCTATTCCCCTGATGGGCCTCAGAGATCCATCAAAGCTTATGCTATTTACCCCAAAGCCACGTTCTTCAACCATGACTGTGTTCCCAACGCCTGCAGGTTCGATTATGTGGACACTGGTGATGAACACAACACTGACATAGTTTTTAGGTTGATCGAGGATGTTCCTGCTGGGAAAGAGATCTGCATCAGCTATTTCAGGATTGGAAGGGATTATTCCACCAGAAAAAGGATCTTGATGGAGGATTATGGCTTCACTTGTGGATGTGATAGGTGCAGGATCGAAGCAAATTGGGGAGAAAACCAGGTGGAGATGAACAGTGACCTGCCACACGTGCGGTTCCTTCGCAAGCATGTTTGTGAGAGGAAGAATTGTGCTGGCACAATGGCTCCTCTGCCTCCAAAAGATTATGTGCCTTCTAATGTTCTGGAGTGTAACTTCTGTGGCAATTTGAAAGAAATATGA 1062 0.4595 MASSSSLLRMEEIAGKGRGLVAAKSLKAGQIILTESPLILYSASPLYAPSSSPFTNCDHCFRILSSHTTIFRCPSCSHHTFCSQSCLSFAQNSSHSNWVCKALTFLLQHPNSTLFQQHPPERQVQARFVVASHNLFLHSPSQLHTFLSLHGTPDTAIYDVAKFLHSLISPLFPPEGQLSVDLTAQLLAKDRLNSFCLMDPYSPDGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDTGDEHNTDIVFRLIEDVPAGKEICISYFRIGRDYSTRKRILMEDYGFTCGCDRCRIEANWGENQVEMNSDLPHVRFLRKHVCERKNCAGTMAPLPPKDYVPSNVLECNFCGNLKEI 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01013 353 SMART set_7 6 271 IPR001214 GO:0005515
Vian10g01013 353 Gene3D - 56 116 - -
Vian10g01013 353 Gene3D SET domain 19 291 IPR046341 -
Vian10g01013 353 SUPERFAMILY SET domain 10 291 IPR046341 -
Vian10g01013 353 ProSiteProfiles SET domain profile. 1 265 IPR001214 GO:0005515
Vian10g01013 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 300 352 IPR044238 -
Vian10g01013 353 Pfam SET domain 17 264 IPR001214 GO:0005515
Vian10g01013 353 Gene3D - 117 194 - -
Vian10g01013 353 CDD SET_SMYD 192 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01013 Vian-Chr10 11118391 11119452 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian10g01013 SET 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01013 - - gmx:100808530 568.926