Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01006 ATGGCTGAGGCTTTGCTCGGAATTGTAATTCAAAACCTGCAATCTTTTGGCCAAGACCAACTTGCAACGTTTTGGGGTGTTCACCAACAGACTCAAAAGCTTTCCAGCAATCTCACTGCAATTCGTGCTGTCCTCAGAGATGCTGAGAGAAAACAAATCACAAGTCATGCTGTCAAAGATTGGCTGCAGAAACTCACAGATGCAGCATATGTGTTGGATGATATCTTAGATCAATGTTCAATTCACTCCACAAAAGTTAATTTTGATGATGCACATACTTCATGCCTATCCCGTCTCCATCCTAATGACATTCTCTTTCGTTTCAATATTGGCAAGAGAATGAAAGACATCACCCGAAGATTTCATGACATTCACGAAGAAAGGAGCATGTTTAATTTAGAACCCGGTGTCACAGAGGTCCAAACAATCCATGATAATTGGCGCCAAACTAGCTCTGACATTACAGAACCTGTAATTTATGGCAGAGACCAGGATCGAGAGCAAATTGTGAAGTTTCTTCTGGAAGACGCTAGTAACAGTGAAGAGCTCTCTATCTTTCCCATAGTTGGTATGGGTGGACTTGGAAAAACAACATTAGCCAAGAAGGTTTTCAATGATCACAGGGTATGCAAACATTTTGAATTGACAGCTTGGGTTTGTGTTTCTGATGATTTCAACACCATGACAATACTACAATCCATCATAGAATGCATCACCGGACAAAATCCCAATATCAATAGCTTAGAAGCAATGCGGAAAAAGGTTGAAGACGTGTTGCATGGGAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCCAGAGAAATGGGAGCAGTTGAAGGGAAAGTTGCAGTGCGCAAGGGCAGCAAAAGGAGCTACCATTTTAGTCACTAGTCGACTCGAGGAAGTTGCTTCCACCATGCAGACGCATCCTGCTTACCGTTTGAAAGAATTGCCAGGAGACGAAAGTTGGTCGTTGTTCAAATACCATGCGTTTGGACCAAACCGAGAAGAAAAGGAAGAGCTCGTGGCAATTGGCAAAGAGATCGTGAGAAACTGCATTGGTTTGCCGCTTGCCATAAAAACACTGGGAAGCCTCTTGCGTGATCAAAGTGAGGTAAGACAATGGATATATGTAAAGGAAAGTAGTTCTAAGACAAATGAGGAAAATTCTATTATGCGTGCTTTGAAACTTAGCTATTCTAATTTGGAGTTGTCATTGCGGAGATGCTTTTCTTTTTGTGCAATTTTCCCCAAAGATTTTGAAATAGACAAGGAAGAATTGATTCATCTCTGGATGGCTAATGGGTTTATTGAAAGTGAAAGAAACATAGAAGTGGAGGATGTTGGAAATAAAGTGTGGAATAAATTATACAGTAGATCATTTTTTCAGGAAGCAAAGTGTGATGAGTTTGGTATGGTCAAAAGTTTCAAGATGCATGATCTATTTCATGATCTTGCTCAGTCTATTATGGGTGAAGAATGTGCGGCTTTTGTGGAAGGAAGGTTGACTCCGTTGTCAAGTAGAGTTCACTATTCAACCTTGTTATCTTCTGATGTTTCTTCTAATGTTTCTTTTCGAGGATTCAAGCATGCTTTCAAGAAAGTTGAATCCCTGCGAACTTTTCTTGATTTGCGGTCTTCTTTTGTTCTTGGTAATGTTGCCCCGGTGCCATCAAACCATTCTCTCCGAGCATTATGCACAAGCTCTTCTTTGTTGTCCCCACTCAAGGATTTAACACATTTGAGATATTTGAGTTTGAATTGTCATTATAAAGCAAACTTAAATAACTTAATTTGTCAAATGCGGAAATTGCAAATTTTGAAATTGCAAAATTGCAGGCGTCTTCTTGGACTGCCCAAAGACATGACACAATTACAAGATCTAAGACATATTGTGATGGATGATTGTGTGTCAGGAGTAGAGACGCTTCCCAAAATTAGCAAGTTAAGGCATCTAAGAACACTAAGCGTTTTCGTGGTGGGTTCAAAGCCAGGGTGTGGCTTAGCAGAGTTGCATAGCTTAAATCTGGGAGACAGGTTAATAATCAGAGGCCTTGAGAACGTCCCCAATGAATGGGATGCTGAACAAGCAAATTTGATTGGTAAGAAGGACTTGCATATCCTGCACTTGTCATGGGATGGTAATGCTAATCCAAAAGGTAGTGATGTAAGTGTGGAGAGAGTATTGGAAGCCCTAGAACCTCCCTCAACTCTCAAGTGTTTTGGGATGAATGGATATAAAGGAAGACAGCTACCCAGTTGGATGAGAAGTTCTCTAGTTTTGAGAGACTTGGTGAAAGTTAAGCTCTCCGACTGTGACAACTGTGAGGAGCTTCCACCACTTGGTAAACTACCACACTTGAAAAGGCTAGAGGTGAGTGGAATAAAAAATGTGAAGTGGATAGATGGTGAGACGTATGACGGCGTGGAGGAGAAGGCATTTCCATCGTTGGAGGAACTGAGAGTGGATAATTTACCAAATTTGGAGAGGTTGTTGAGGGATGAAGGAGTAGAGATGCTCCCTCGTCTTTCCCAATTAACAATTGAAGGTGTGTTGAACTTTAAAGTCCCACGTCTTCCTTGTGTTGAGGAACTTAGGATTGGCGAAGCGGCTTCCTTCATGGAAGTTGTGGGGAATATGGCTTGTCTAAAGACCTTGAGCATTATTGGCGTTAAAGGAGTGGTGGTATTACCCGACGAATTCAGGAGGTTGGATGCACTACAGGAACTATACATTGCAGCATGGTATGATGTGGAGTATTTTCCAGAACACGTGCTGGAAGGTCTAACTTCTCTTCGAACTTTGAACATTTTTCTCTGTAAGAAATTAAAATCGTTGTCTGAAGGTGTGCGACATTTGGCTCGTCTTGAGAGTCTGATGATCAGTGGTTGTCCAGAGCTGGTGGCTCTACCAAGCAATATGAGTCAACTAACTGCCCTGCGGATGGTTTCAATCAGTTATCGCTGCACATTACCAGATGGCTTACAACGTGTCCCCTCCCTACGAGTTTTATATATAATCGAATGGACGTGTACTTCATTGCCGGACTGGCTGGGAGACATGACTGCTCTTGAAGAATTAACCATTTTGAATTGTAAGGAGTTGAGGTCACTGCCGAGTAGCATTCAACGCCTCACCAACTTGTCTCATTTAACTATACGCGAATGTCCTCATCTGAAAAAGCGATGCAAGAGGGAAACAGGAGAGGATTGGCAATACATAAAGCATATTCCAAAAATAGAACTATATTTCTTGAGGGAACCGACGTTTTGTGATGAATTCAAGAGTATTTTGTTTACTTCTCCCCGTAATGTGTCACTCTGTCTTTGA 3342 0.4153 MAEALLGIVIQNLQSFGQDQLATFWGVHQQTQKLSSNLTAIRAVLRDAERKQITSHAVKDWLQKLTDAAYVLDDILDQCSIHSTKVNFDDAHTSCLSRLHPNDILFRFNIGKRMKDITRRFHDIHEERSMFNLEPGVTEVQTIHDNWRQTSSDITEPVIYGRDQDREQIVKFLLEDASNSEELSIFPIVGMGGLGKTTLAKKVFNDHRVCKHFELTAWVCVSDDFNTMTILQSIIECITGQNPNINSLEAMRKKVEDVLHGKRYLLVLDDVWNEDPEKWEQLKGKLQCARAAKGATILVTSRLEEVASTMQTHPAYRLKELPGDESWSLFKYHAFGPNREEKEELVAIGKEIVRNCIGLPLAIKTLGSLLRDQSEVRQWIYVKESSSKTNEENSIMRALKLSYSNLELSLRRCFSFCAIFPKDFEIDKEELIHLWMANGFIESERNIEVEDVGNKVWNKLYSRSFFQEAKCDEFGMVKSFKMHDLFHDLAQSIMGEECAAFVEGRLTPLSSRVHYSTLLSSDVSSNVSFRGFKHAFKKVESLRTFLDLRSSFVLGNVAPVPSNHSLRALCTSSSLLSPLKDLTHLRYLSLNCHYKANLNNLICQMRKLQILKLQNCRRLLGLPKDMTQLQDLRHIVMDDCVSGVETLPKISKLRHLRTLSVFVVGSKPGCGLAELHSLNLGDRLIIRGLENVPNEWDAEQANLIGKKDLHILHLSWDGNANPKGSDVSVERVLEALEPPSTLKCFGMNGYKGRQLPSWMRSSLVLRDLVKVKLSDCDNCEELPPLGKLPHLKRLEVSGIKNVKWIDGETYDGVEEKAFPSLEELRVDNLPNLERLLRDEGVEMLPRLSQLTIEGVLNFKVPRLPCVEELRIGEAASFMEVVGNMACLKTLSIIGVKGVVVLPDEFRRLDALQELYIAAWYDVEYFPEHVLEGLTSLRTLNIFLCKKLKSLSEGVRHLARLESLMISGCPELVALPSNMSQLTALRMVSISYRCTLPDGLQRVPSLRVLYIIEWTCTSLPDWLGDMTALEELTILNCKELRSLPSSIQRLTNLSHLTIRECPHLKKRCKRETGEDWQYIKHIPKIELYFLREPTFCDEFKSILFTSPRNVSLCL 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01006 1113 Gene3D - 6 117 - -
Vian10g01006 1113 Pfam NB-ARC domain 163 405 IPR002182 GO:0043531
Vian10g01006 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 417 IPR027417 -
Vian10g01006 1113 Gene3D - 321 407 IPR042197 -
Vian10g01006 1113 SUPERFAMILY RNI-like 844 1075 - -
Vian10g01006 1113 CDD RX-CC_like 2 124 IPR038005 -
Vian10g01006 1113 SUPERFAMILY L domain-like 467 892 - -
Vian10g01006 1113 FunFam Probable disease resistance protein At1g63360 403 492 - -
Vian10g01006 1113 Gene3D Ribonuclease Inhibitor 872 1073 IPR032675 -
Vian10g01006 1113 Gene3D - 409 492 IPR036388 -
Vian10g01006 1113 FunFam Probable disease resistance protein At1g61300 141 315 - -
Vian10g01006 1113 Gene3D Ribonuclease Inhibitor 507 871 IPR032675 -
Vian10g01006 1113 PRINTS Disease resistance protein signature 185 200 - -
Vian10g01006 1113 PRINTS Disease resistance protein signature 356 370 - -
Vian10g01006 1113 PRINTS Disease resistance protein signature 258 272 - -
Vian10g01006 1113 PRINTS Disease resistance protein signature 603 619 - -
Vian10g01006 1113 Pfam Rx N-terminal domain 6 87 IPR041118 -
Vian10g01006 1113 PANTHER DISEASE RESISTANCE PROTEIN RP 36 841 IPR044974 GO:0006952
Vian10g01006 1113 Gene3D - 145 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01006 Vian-Chr10 11004941 11008282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01006 188 798 WRKY Transcription Factor Family AT5G45050 23.417 2.59e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01006 - - vum:124833357 1768.44