Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00964 ATGGAGGGTGGGAACATAAGACAGTGGTTGAACTTTCTGGTTTGTGCACTGCTGTTTCTGATAGCAGAGGCTTCTTATGTGCCAATCACCTATCTTCAGAACGCTGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCATTTTGATAGGGGATCTGGAACAGGGATTAACAATTGGTTGGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGTCTCTCTCGCAAGACCAATCGTTTAGGTTCATCTAAGCAAATGGCAAAGCAAATTGCCTTTTCGGGAATTATGAGCAACATGCAAATCTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGCGATGGTTCATCTTTTACTGGTGATGTAGAAGAAGTCAATCCAGTTACTAAGTTGCACTTTAGAGGAGCAAGGATTTTTGCTGCTGTCATGGAGGATTTACTAGCAAAAGGAATGGAAAATGCTCGAAATGCAATTATTTCTGGATGCTCAGCTGGAGGATTAACTTCAGTACTGCATTGTGATCGCTTCCGAGCTCTATTACCTGGAGGAGCCAGAGTGAAATGCCTCTCAGATGCTGGTTATTTTATCAATGCAAGGGACGTCACTGGGGCATACCACATTCAACAGTACTTCAGTCAAGTTGTTGCTACACATGGCTCTGCAAGGAATTTGCCTCAGTCATGCACTTCAAGACTTAGCCCAAAGCTATGCTTTTTCCCACAATATTTGGCGTCACATATCACTACGCCGATCTTCTTTGTAAACGCGGCATACGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGTTGCTGATCCTGAAGGCCATTGGCATAGCTGTAAGCTGGATATAAACAACTGCTCACCTGATCAATTAGATCTAATGCAAGGCTTCAGGACAGAATTTTTAAGGGCATTGACAGTGCTAGGCAACTCTTCATATAAAGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCTCCAGAGCTGGAAAAGACAACAATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGACATTCCATCAGATAGATTGCCCTTACCCCTGCAACCCCACTTGTCACAACCGCGTTTTCGGACCAGAAGACAACCACCAAGGAGTATAG 1203 0.4372 MEGGNIRQWLNFLVCALLFLIAEASYVPITYLQNAVAKGAVCLDGSPPAYHFDRGSGTGINNWLVAFEGGGWCNNVTTCLSRKTNRLGSSKQMAKQIAFSGIMSNMQIFNPDFYNWNRIKVRYCDGSSFTGDVEEVNPVTKLHFRGARIFAAVMEDLLAKGMENARNAIISGCSAGGLTSVLHCDRFRALLPGGARVKCLSDAGYFINARDVTGAYHIQQYFSQVVATHGSARNLPQSCTSRLSPKLCFFPQYLASHITTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRALTVLGNSSYKGMFIDSCYAHCQTEMQETWLRSDSPELEKTTIAKAVADWFYERRTFHQIDCPYPCNPTCHNRVFGPEDNHQGV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00964 400 PANTHER NOTUM-RELATED 17 388 IPR004963 GO:0016787
Vian10g00964 400 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
Vian10g00964 400 SUPERFAMILY alpha/beta-Hydrolases 87 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00964 Vian-Chr10 10429849 10432896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00964 6 395 Carbohydrate Esterase AT4G19420 62.353 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00964 K19882 - gmx:100818146 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00964 10 10429849 10432896 Vian10g00964 10 10429849 10432896 ECH