Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00959 ATGGCTTGGAATGGAATTTCCGTGAGGCGCAGTGAACCGGAAGTGGTGGTGCCGGCAAAAGCTACTCCGAGTGAAGTAAAGCATCTTTCGGACATTGATGACCAAGAAGGGCTTCGCATGCAGCTCTCCTTCATCATGTTCTATAAAAGGGAGGAGGCAATGAAGGAGTTTGATCCTGCCATGATCATAAAAAGGGGAATCTCTGAAGCTCTTGTTCACTACTATCCCTTGGCTGGGAGGGTGGCGGAAGGGTCTAACAGAAAGCTGGTGGTGGAGTGCAGCGGTGAGGGGGTTATGTTTGTTGAAGCTGAGGCTGATGTTGCATTGGAGGAGCTTGGTGACTCAATTGGACCACCTTGTCTCCATAGGAAACACTTCCTCTATGCACTGCCTGCATCTCAAGGAATTCTTGCCTCTCCTTTGTTGTTCATTCAGGTAACTCGTCTTTCATGCGGAGGGTTCGTATTTGCCGTGTGCATGAATCACGTCGTGTGCGACTCTTTCGGGCTGGTTCAGTTCCTCAACACGGTGGCAACAATGGCAAGGGATCCACACGCCGCAATCCAACAACCGGTGTGGAGAAGAGACATATTTAGCGCACGCAACCCTCCACGTGTGACTTGCACACACCACGAGTACGAGGATGTTGTCCACCATAGTACTACAACTACTTCTTCACAGGAAGACTTGTCTCACGAATCATTTTTCTTTGGGAAGAAAGAGATTCAAACGCTTCGAAATCATCTTCCCCGGAACCTTCAGAAATGCTCAACTTTCGAGTTACTTACGGCATGCTTATGGAAGTGTCGTACAATGGCGCTTGATCTTGACCCCAACGAGGTGGTTGGTGTGTCGAGTTTCGTCACTACTCATGGGAAGGTGGATGTGCCAAAAGGGTATTATGGGAATGCGTTTGTGTTTCCAATGGCACTATCAAAGGCTGGTTTGCTGTGCAAAAGCTCGTTAGGGTATGCTTTGGGGTTGATCAGAGAAGCCAAGGGTCGAATGAGTGAAGAGTACGTTAGGTCAGCGGTTGATCTTATGGTTCTGAAGGGGCGTCCTATGCATAGGACACATGGGAGTTTCTTTGTAGGGGATATGACTCGTGTGGGTTTTGGTGAAGTTGATTTTGGTTGGGGAAAGCCCGTTTATGGAGGTCCTGTTGGAGCCATACCATTAGTCAGCTACCTTGCAAGGTTCAAAAATGGTAGAGGCAAAGATGGGATTATGGTGCCAATATTGTTGCCACAGCTTGTCATGAAAAGGTTTCTCAGGGAGCTCACCAAAATGACTAGTCCCGACATCAAAACAAGAGCTAGATCCATGATATAA 1332 0.4805 MAWNGISVRRSEPEVVVPAKATPSEVKHLSDIDDQEGLRMQLSFIMFYKREEAMKEFDPAMIIKRGISEALVHYYPLAGRVAEGSNRKLVVECSGEGVMFVEAEADVALEELGDSIGPPCLHRKHFLYALPASQGILASPLLFIQVTRLSCGGFVFAVCMNHVVCDSFGLVQFLNTVATMARDPHAAIQQPVWRRDIFSARNPPRVTCTHHEYEDVVHHSTTTTSSQEDLSHESFFFGKKEIQTLRNHLPRNLQKCSTFELLTACLWKCRTMALDLDPNEVVGVSSFVTTHGKVDVPKGYYGNAFVFPMALSKAGLLCKSSLGYALGLIREAKGRMSEEYVRSAVDLMVLKGRPMHRTHGSFFVGDMTRVGFGEVDFGWGKPVYGGPVGAIPLVSYLARFKNGRGKDGIMVPILLPQLVMKRFLRELTKMTSPDIKTRARSMI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00959 443 PANTHER ACYL TRANSFERASE 4 6 430 - -
Vian10g00959 443 Gene3D - 3 211 IPR023213 -
Vian10g00959 443 Pfam Transferase family 8 426 - -
Vian10g00959 443 Gene3D - 212 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00959 Vian-Chr10 10382223 10384537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00959 6 392 Monolignol Biosynthesis Gene Families AT5G48930 29.529 1.07e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00959 K19861 - gmx:100817429 546.584