Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00958 ATGTCACCAAGGAGTTTCGCCGTGGTGCATGGTGGGGCAGAACTGGTGATGCCAGCAGGACGAACTCCACGAGAACTGAAAAAGCTTTCTGACATAGATGATGAAGAGGGGCTACGTTTTCACCTTCCTGTGATCATGTTCTACAGAAATGGTTCAGTTGTGGAAGGAAAAGATGTTGGTAAGGTTATAAGAAATGGTTTAAGTAAAGCACTAGTGTACTATTACCCTCTTGCTGGTAGACTGAGAGAAGGGCCTAACAGAAAGCTTATGGTGGATTGCAATGGTGAGGGGATGTTGTTGGTGGAAGCTGAGGCTGATGATTCACTGAGGGAGTTAGGTGATAAGATTCTTCCACCCTGCCCTTACATGAAGGAGTTTCTTCTTGATGTTCCTGGATCACCACGCATTCTTGGAACCCCTCTCTTGTTTCAGGTAACCCGTTTAACATGCGGAGGATTTGTTTTCGCCGCTCGCATGAACCACACAATCTGTGACTCATTGGGGTTGGTGCAATTTCTGACCATGGTGGGTGAGATTGCAAGAGGTGCTTCCATAACCCAGTTCCCTGTGTGGCAAAGAGAGTTATTCAGTGCAAGGAACCCACCAAGAATCACATGTGCACACAACGAATATGAAACCCAACATTGCCAGAAAGAAACATGGGACACCCACGAAATGGACCATGGATCATTTTTCTTTGGTCCCAAAGAGATTGCAACCCTTCGGAGTCACCTTCCCATGCACCTCCAAAATTCTTCAACTTTTGAGGTGCTCTCTGCCTGTTTGTGGAAATGTCGAACCATAGCACTTGGGCTCAAACCCAACGAGACTGTGGGCTTGTCACCCTTTATCACTGCTCGAGGCAAATTGGGCCAACAAGTGCCCAATGGGTATTATGGCAATGCCTTTGCCTTCCCAATGGCTCTTGCCAGGGCTGGGCCTTTGTGCCAAAACCCATTGGGGTATGCATTGGAGTTAGTAAAAAAGGCAAAGGCTCAGATGGGTGCAGAATATGTCAGTTCTGTGGCTGATCTTATGGTTCTAAAGGGTCGACCCAAGTATAGGACTGAAGGGAACTACCTTATTGGGGACACTACTCATGTGGGGTTCTATGAAGTGGATTTTGGGTGGGGGAGTCCTATATATGGAGGACCTGCTGGGGCTATACCTTTTGTTAGCTTCTATGGACGTTTTAGGAACAGTGAAGGAGAGGATGTAATTGTGGTGCCAATTTTGTTGCCACACCATGTCATGAGGAGGTTTCTCTCTGAACTGGTAAAGATCACAAACAAGGACCCTATGGACTTTTCTGATGAGAATATGCCAAATAGGTTTGTGTCCATGTGCTTAGGAAATGCCAGCATCTTGATAAGTGCTGCAGAGCTCCCAAAGCTTTTTCACTTTCTTGCAGTAATGTTTAGTTTCTTTTAG 1431 0.4626 MSPRSFAVVHGGAELVMPAGRTPRELKKLSDIDDEEGLRFHLPVIMFYRNGSVVEGKDVGKVIRNGLSKALVYYYPLAGRLREGPNRKLMVDCNGEGMLLVEAEADDSLRELGDKILPPCPYMKEFLLDVPGSPRILGTPLLFQVTRLTCGGFVFAARMNHTICDSLGLVQFLTMVGEIARGASITQFPVWQRELFSARNPPRITCAHNEYETQHCQKETWDTHEMDHGSFFFGPKEIATLRSHLPMHLQNSSTFEVLSACLWKCRTIALGLKPNETVGLSPFITARGKLGQQVPNGYYGNAFAFPMALARAGPLCQNPLGYALELVKKAKAQMGAEYVSSVADLMVLKGRPKYRTEGNYLIGDTTHVGFYEVDFGWGSPIYGGPAGAIPFVSFYGRFRNSEGEDVIVVPILLPHHVMRRFLSELVKITNKDPMDFSDENMPNRFVSMCLGNASILISAAELPKLFHFLAVMFSFF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00958 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 421 - -
Vian10g00958 476 Pfam Transferase family 13 423 - -
Vian10g00958 476 Gene3D - 209 423 IPR023213 -
Vian10g00958 476 Gene3D - 10 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00958 Vian-Chr10 10372951 10379399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00958 13 428 Monolignol Biosynthesis Gene Families AT5G48930 29.167 4.41e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00958 - K19861 gmx:100817429 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00958 10 10372951 10379399 Vian10g00958 10 10372951 10379399 ECH