Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian10g00940 | ATGGACCAAAATTTACCAAATCTGCAAGTTCAGGACAGGAAAAGGTATAAAAGATGGTCCCCAACTGAAGAACAAGTGGCCTTATTAAAGGCATTATTTGTGCACGGGATAAGAAACCCGAATAGAGAACAAGCACACGAAATCTCAGAAAAACTTAGGGTTTATGGGGAGGTCAGGGAAATTAGTGTCCAATACTGGTTTCAGAACTATGGGTACCGCTACAGACAGAAACGCCGGAAGCGCAGCACAACTACCATATCCTACTCCCCCATACCCCTTCTTTTGGATGATCTATTAAGGACATTGCCGCCAGTGCCAGATCGAGTGACGCTCGATCTCTTTCCGATCCCACCTGTTCCGGACAAAGCTGAGGTCCCTCCCGTCTTTGGGTTCCCGGTGAAGCCTCCCTCTGTCGAACTCACCTTGCGACTGCCCTCGGCTGACGAGTAG | 450 | 0.4889 | MDQNLPNLQVQDRKRYKRWSPTEEQVALLKALFVHGIRNPNREQAHEISEKLRVYGEVREISVQYWFQNYGYRYRQKRRKRSTTTISYSPIPLLLDDLLRTLPPVPDRVTLDLFPIPPVPDKAEVPPVFGFPVKPPSVELTLRLPSADE | 149 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian10g00940 | 149 | PANTHER | WUSCHEL-RELATED HOMEOBOX 1-RELATED | 11 | 84 | IPR044555 | GO:0003700|GO:0099402 | |
Vian10g00940 | 149 | SMART | HOX_1 | 14 | 83 | IPR001356 | GO:0003677 | |
Vian10g00940 | 149 | Gene3D | - | 1 | 69 | - | - | |
Vian10g00940 | 149 | CDD | homeodomain | 15 | 69 | IPR001356 | GO:0003677 | |
Vian10g00940 | 149 | Pfam | Homeodomain | 15 | 76 | IPR001356 | GO:0003677 | |
Vian10g00940 | 149 | SUPERFAMILY | Homeodomain-like | 8 | 80 | IPR009057 | - | |
Vian10g00940 | 149 | ProSiteProfiles | 'Homeobox' domain profile. | 12 | 77 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian10g00940 | Vian-Chr10 | 9775501 | 9776041 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian10g00940 | 18 | 88 | Wox Gene Family | AT5G05770 | 47.887 | 2.81e-16 | 68.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-WOX | Vian10g00940 | Homeodomain | 9e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian10g00940 | - | - | vum:124821198 | 177.178 |