Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00937 ATGCCACAGAACTGCATAGCACCAAAGCCAGAATATTGTAATAGTCTTCACTCTGTGGAAGGACCTCCAGAGATGACTGAGTCCCATAACTCAACTGTCCTTTCTCATTCCATGCAAACCAATGAACAACAACAACAACCTTTTCCAAAACTCATTATGTACCCAATAACTCTGAAGTTTGAGGAACTGGTGTACAAAGTTAAACTAGAGCAGAAAGGAGGATGCTGGGGCAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATTACTGGTGTGGTGTGTCCAGGAGAAATACTAGCTATGCTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGCCGGCTCAGCGGCAAACTATCTGGTAAGATCACGTACAACGGGCAACCTTTTTCTGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATATCCTCACCTAACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTGAGGCTTCCCAACAGCTTGAGCAGAGATGAAAAGGTTCAACATGTAGAGAGAGTGATCACTGAACTAGGCCTGACTCGTTGCAGGAGCAGCATGATAGGTGGCCCACTTTTTAGAGGAATTTCAGGAGGAGAAAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTCCTGTTGCTGGATGAGCCTACTTCAGGCTTGGATTCCACCACAGCACAAAGAATCCTCAACACAATCAAGCGCCTAGCTAGTGGGGGTAGAACTGTTGTCACCACTATTCACCAACCCTCTAGTAGGCTCTACTATATGTTTGATAAGGTGGTCTTGCTCTCGGAAGGCTGCCCCATCTATTATGGTCCTGCTTCAACTGCCTTAGACTACTTCTCTTCTGTTGGCTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCAGACTCCAAGCAAGCAACTGAACAAAGTGAGGGACTGGAACAAGAGAGGAAACAGGTGAGAGAATCCCTCATCTCTGCTTATGAGAAGAATATATCTCCGAGGCTGAAAGCTGAGATTTGCAGCATGGAAGTGAACAACCAAAATATCACAAAAGATGCTTGTGCAAGTAGGAAATTCGATAAAGCCAGAACAATGGAGCACAAGCTGGTGGCATCAGTTCAAAGTACTATTACAAAGGGGAGTGAAGGAGCGAAGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGTTCATCAGGAATGTATCGCCTTTCTTCCTACTTTCTTGCCAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACTGCATTTGTTTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCTCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGTTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATTGTGTGGCTCAAGTATTTGAGCTATAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTACTATGAATGTTCAAAGGGGGAGCTGTGCAAAGTGGCAGATTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCCTGATGTTGGTGGGTTATCGACTAGTTGCTTATTTTGCACTGCATAGAGTTAGGTAG 1881 0.4466 MPQNCIAPKPEYCNSLHSVEGPPEMTESHNSTVLSHSMQTNEQQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLSRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKQATEQSEGLEQERKQVRESLISAYEKNISPRLKAEICSMEVNNQNITKDACASRKFDKARTMEHKLVASVQSTITKGSEGAKVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLVAYFALHRVR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00937 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 302 IPR027417 -
Vian10g00937 626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 310 IPR003439 GO:0005524
Vian10g00937 626 Pfam ABC-2 type transporter 413 570 IPR013525 GO:0016020|GO:0140359
Vian10g00937 626 Gene3D - 77 304 IPR027417 -
Vian10g00937 626 Pfam ABC transporter 89 238 IPR003439 GO:0005524
Vian10g00937 626 CDD ABCG_EPDR 55 292 - -
Vian10g00937 626 SMART AAA_5 97 287 IPR003593 GO:0016887
Vian10g00937 626 Coils Coil 329 349 - -
Vian10g00937 626 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524|GO:0016887
Vian10g00937 626 FunFam ABC transporter G family member 22 75 304 - -
Vian10g00937 626 Pfam ABC-2 type transporter 267 406 IPR043926 GO:0140359
Vian10g00937 626 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00937 Vian-Chr10 9737889 9740641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00937 87 286 Calmodulin-binding Proteins AT2G36910 30.332 2.19e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00937 K05681 - gmx:100780191 1109.36