Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00935 ATGGCAGAAGGTTTAGAATCAATGGGAGTTGTATCAGTGAGGAGTAGATCGTGGAAAGCTCATATGGGCATGACACTGTCACAGGCATTCTATGGTGGCTACCATGTAATCACAAAAGTGGCCCTTAATGTTGGGGTCAACCAACTAGTTTTCTGCTTCTACAGGGATCTCCTTGCCTTCACTATTCTTGCTCCTCTCGCTTTTTTTCTTGAAAGAAGAACTAGACCACCCCTTACCAAGAAGCTACTGATGTCCTTCTTCATTCTTGGATTGACCGGGGTATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAACTATTCCAGTCTTCACATTTTTGTTTACTTTGATGATGGGAATAGAAAAACTGAACTTGCTCACATATGAAGGTTGGGCAAAGGCTGGAGGAACTCTTTTATGTGTTTCAGGAGCCATATTTATGGTTTTTTATCGTGGTCCAGCTGTGATAGGGGGTAACGAAATGAACCAAGTTACACAAATTAAACCAAGTGGCAGAGGCCAGCCAGAGCCTTCAGTATGGTTAATCAACAGTTATCTTGATATTGGATTAGATAACTTTCAGCTTGGGGTTGTGTTCTTGATAGGGAACTGCATATGCATGGCTGCTTATCTAGCCCTTCAGGCACCATTATTGAAAAAGTATCCATCAAATCTATCTGTCACAGCATATTCATTCGCCTTTGGAGTTGCACTGTTGGTGATTGCATCATTTTTCATGGTTAACGAGTCAACTGACTGGATTTTGACACAATCAGAGATACTGGCTGTTGCATATGCTGGAACTATTGCATCTGCTCTTAACTACGGAATCATTTCATGGAGCACTAAGATCTTGGGGCCAGCTTTGGTTTCCCTTTACAATCCTCTTCAACCTGCATTTTCTGCCTTCCTTTCACAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGCATCCTAGGGGGATCTTTGATCATTGCTGGTCTATATTTAGTTACTTGGGCATCTTATAGAGAAAGACAAGAAACTTATGGAGTTACTCCTAATGGCTCTTGGATCTCTGAACCACTTCTTCATGAAAAAAGTGAATACCAGAATGATCACACTCAGGGTCCTCCAGCGTAA 1161 0.416 MAEGLESMGVVSVRSRSWKAHMGMTLSQAFYGGYHVITKVALNVGVNQLVFCFYRDLLAFTILAPLAFFLERRTRPPLTKKLLMSFFILGLTGVFGNQLLFLIGLSYTNPTYAAAVQPTIPVFTFLFTLMMGIEKLNLLTYEGWAKAGGTLLCVSGAIFMVFYRGPAVIGGNEMNQVTQIKPSGRGQPEPSVWLINSYLDIGLDNFQLGVVFLIGNCICMAAYLALQAPLLKKYPSNLSVTAYSFAFGVALLVIASFFMVNESTDWILTQSEILAVAYAGTIASALNYGIISWSTKILGPALVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSLIIAGLYLVTWASYRERQETYGVTPNGSWISEPLLHEKSEYQNDHTQGPPA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00935 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 162 - -
Vian10g00935 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 350 - -
Vian10g00935 386 Pfam EamA-like transporter family 208 345 IPR000620 GO:0016020
Vian10g00935 386 Pfam EamA-like transporter family 24 143 IPR000620 GO:0016020
Vian10g00935 386 PANTHER WAT1-RELATED PROTEIN 22 352 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00935 Vian-Chr10 9683600 9688219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00935 103 373 Nodulin-like Gene Family AT5G45370 59.636 4.23e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00935 - - gmx:100793730 623.624