Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00934 ATGGCGATGGTACAGCTTTTCAATGGTGGCTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGTATCAACCAGTTAGTCTTCTGCGTATTCCGCGATCTCATTGCCCTTTCCATCCTCGCACCCTTTGCTTATATCCGTGAAAAACAGATTCGACCACCCACTACTAAGAATCTACTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAACCGTCTATTCCAGTCTTTACCTTTATATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTAGTCAGATATGATGGTCTGGCTAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCTGTAGTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCTGATATGAATCTTGCTATACAAAATGAAATAAGTGCCAAAGGTCAGCCAGAGCCATCTGGGTGGCTAATTGGTAGTTTACAGGACTTCGGGTTAGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATTTGTATGGCTGCGTTTCTAGCCATTCAGGCACCAGTATTAAAAAAATATCCTGCAAATATATCGGTCACAGCATTTTCATACTCCTTCGGAGCTTTACTGATGGTTATAGTGTCATTATTCATGAATTATGAGGCAACTGACTGGACTTTGACATCATCAGAAATCCTTGCTGTTATGTATGCTGGAACTGTTGCATCTGCCCTTAACTATGGACTCATTACATGGTGTAACAAAATCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCGCTTCAACCTGCGTTTTCAGCCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGTTCTTTTATCATTACTGGTCTATATTTAGTTACTTGGGCATCATTTAGAGAAAAACGAGCATCTCTTGGAGTTGGAGGAGCTAGTCCTTCCTCTTGGGTCTCTGAACCACTTGTTCACGACAGAATTGCACTCCAGAAAGGCCACGCTTTCTCTGGGTCCTCCTCCCTTTCCTCCAAAACCTTATCAGATTAA 1125 0.4258 MAMVQLFNGGYHVITKVALNVGINQLVFCVFRDLIALSILAPFAYIREKQIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFILAVMMGTERVNLVRYDGLAKVGGTIICVSGAVVMVLYRGPALIGYADMNLAIQNEISAKGQPEPSGWLIGSLQDFGLDHFHLGVLCLIGNCICMAAFLAIQAPVLKKYPANISVTAFSYSFGALLMVIVSLFMNYEATDWTLTSSEILAVMYAGTVASALNYGLITWCNKILGPAMVSLYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIITGLYLVTWASFREKRASLGVGGASPSSWVSEPLVHDRIALQKGHAFSGSSSLSSKTLSD 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00934 374 PANTHER WAT1-RELATED PROTEIN 1 329 IPR030184 GO:0016020|GO:0022857
Vian10g00934 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 328 - -
Vian10g00934 374 Coils Coil 373 374 - -
Vian10g00934 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 32 139 - -
Vian10g00934 374 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Vian10g00934 374 Pfam EamA-like transporter family 6 137 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00934 Vian-Chr10 9671554 9678330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00934 80 350 Nodulin-like Gene Family AT5G45370 63.370 3.01e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00934 - - gmx:100787738 604.364