Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00922 ATGAATGCCTCTACAAGATTGATTGATGCATCGGAAGCCTTTGCAGGGTACTTTACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCCCTAAATAAGACCAAGGCCACAGGGAAGGTTCTTGTGTGTCGACATGCAGAATATTCATCGGAGTCAAAGTTGGAAAAGAGTAGGATTGCGAAAGAGGCAGGTGCTGTTGGGATGATACTCATTGATGAGGCAAATCAAGGTGTTGCCACCCCATTTGTAATACCTTCAGCCATTGTTGGAACGAAAACTGGAGAACGGATTCTATCTTATATCAACAACACACGCTTGCCTATGTCAAGGATTTCCAGAGCAAAGACAGTACTAGGAGCACAGCCCGCTCCCCGTGTAGCAGCATTTTCTTCTAAAGGTCCAAATGCATTAACCCCAGAAATTTTGAAGCCGGATGTTACAGCTCCTGGATTGAACATCCTTGCAGCATGGTCTCCAACTGCAGCTGGAATGAAGTTCAATATTTTATCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAACTCTGGTCAAAGCTGTGCATCCTTCATGGTCTCCTTCTGCTATAAAATCTGCGATCATGACAACTGCAACAATTCTTGATAAGCACCACCAACCCATTAGAGCGGATCCTGACAAAAGAAGGGCTAATGCTTTTGATTATGGATCTGGCTTTGTGAATCCTACCAGAGTTTTGGATCCAGGTCTTGTCTATGATTCACATCCAAATGATTTTGTTGCATTCCTATGTTCACTTGGTTATGATGATAGATCACTCCGCCTTGTGACAAGAGACAACAGCACATGTGAAAGGGCATTCAAAACACCATCGGAACTCAATTATCCATCTATTGCAGTCCCCAATCTAGAAGACACTTTTTCAGTAACCCGAGTTGTGACTAATGTTGGAAAAGCAAGAAGTGTATATAGATCTGTAGTGTTGTCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAATCGATTAGTGTTCACTAGTGTAGGACAGAAAATCAAGTTCAGTGTAAATTTTAAAGTGGCTGCTCCCTCAAAAGGCTATGCATTTGGTTTCTTGTTATGGAAAAACGGAATATCACAGGTCACAAGTCCTTTAGTTGTCCGGGTTGCACCACCAAATCTTGGGTTGGTTAGATAA 1179 0.4241 MNASTRLIDASEAFAGYFTPYQSSYCVDSSLNKTKATGKVLVCRHAEYSSESKLEKSRIAKEAGAVGMILIDEANQGVATPFVIPSAIVGTKTGERILSYINNTRLPMSRISRAKTVLGAQPAPRVAAFSSKGPNALTPEILKPDVTAPGLNILAAWSPTAAGMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHQPIRADPDKRRANAFDYGSGFVNPTRVLDPGLVYDSHPNDFVAFLCSLGYDDRSLRLVTRDNSTCERAFKTPSELNYPSIAVPNLEDTFSVTRVVTNVGKARSVYRSVVLSPAGVNVTVVPNRLVFTSVGQKIKFSVNFKVAAPSKGYAFGFLLWKNGISQVTSPLVVRVAPPNLGLVR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00922 392 Pfam Subtilase family 116 209 IPR000209 GO:0006508|GO:0008236
Vian10g00922 392 Pfam Fibronectin type-III domain 287 381 IPR041469 -
Vian10g00922 392 FunFam Subtilisin-like protease SBT1.5 258 384 - -
Vian10g00922 392 CDD PA_subtilisin_like 15 111 - -
Vian10g00922 392 Gene3D - 258 384 - -
Vian10g00922 392 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 381 IPR045051 -
Vian10g00922 392 ProSitePatterns Serine proteases, subtilase family, serine active site. 171 181 IPR023828 -
Vian10g00922 392 ProSiteProfiles Serine proteases, subtilase domain profile. 1 241 - -
Vian10g00922 392 Pfam PA domain 14 97 IPR003137 -
Vian10g00922 392 SUPERFAMILY Subtilisin-like 125 342 IPR036852 GO:0004252|GO:0006508
Vian10g00922 392 Gene3D Peptidase S8/S53 domain 119 254 IPR036852 GO:0004252|GO:0006508
Vian10g00922 392 Gene3D - 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00922 Vian-Chr10 9545641 9547390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00922 22 379 Subtilisin-like Serine Gene Family AT2G05920 41.867 3.38e-90 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00922 - - gmx:100784026 704.131