Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00890 ATGGGAGGCTTATTACACTTCTTTGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCTTGCTCGGAAGAGACATCATGGTGGCCTCGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACCCCTCAGCACTACTGCCCACAAGGAGAATTATCAGTATATTCCCTATCTCTATTCTGTGTCCTTGTTAACAATGACCTTTCCGATTTAAGTTTTGAGAATGACCCCTCAATGTGCAATTATCAAGTGGAAGAAGAGGGCAGGCCTGAGAATAATCGTTATTCAAACGTGGGTTCAATGAAAAAACTGATCAATGAAGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAGAGAATGAGTGAAAACGTGGGGAAGAAGTCTTCAGAGAAAGGATTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCTAACTTTAATTCTTCGAGCCAGATGGATTTTGAGTCATTATACGAAGACATGGATGTTGATGACAACGATGATGGGTGGAACAAGAGTTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGAAGAGGAACTACAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAAGAGTGTTCGAAGGTTGCTGAAATTGATAGTGTTCCTAAACGGTTGCTAGCTCAAGAAAACTCGAACAAAGAAAAGGTGATTCATAGTGATTTAGTTTTACAAAGAGCAGCAGCAGGGAAATCTGCAGATCTTGATAGCCATTCATTCAAAACACCACCACCTGAAAGTTATGGTTCAGAATATCGTGGTGACATGATGGAGTTAGTCCCAGCTACTCAAAGGAAAACCTTTCCTCCTAGGAGCAGAACATTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCCTGCAACAGATTAGACACGTCTGCTTCTCCCACCAGGATAGTTATCTTGAAGCCTGGTCCTGAGAGCATTAGCAACCATGAAGAGAATTGGACCATTTCAACAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTTAAAAAGATTTCTGTGGTTCGAGGGAGTGGAATTGAAACACCTTACAATGAAAAACCATCTGATCCTAAACTAATAGCTCGACATATAGTAAAGCAAGTCAGAGAAAGTGCTACCAGAGATGCTGACACAAATTTACTCCATTCTGAATCAACAGGGTCGTTCAAGAGTGAAATGCAATTCAATGGAGCAACTTCCCCTGAAGTTATCAGCAGAGATACCCGGAAGTTCTTGTCAGATAGGCTAAGAAATGTTGTGAGAAGTGAAGCACGTGCTGGTTTTCCCGAGGGAAAATCAAGGTCACTTGCATTAGATAGTCATAAAGATGGACTACAGCAAGGGGGGGATATTATGAAGTACGCAAGTAACTGGGAAATTTCCAAAGAGGACGTAGAAATACAAACAGGTTCTTTCAGACATGAACTGGATGAAAATATATTTCTGCACAGAGAGTTGTCTCCAAGGAATCTTGTAAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACCTTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGATAGATTTAATATTAAGGAACGAGTCTCCAATTTTAAATATAATATTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAACGGTGGAATCACGTGCCAATGAGTATGGTCCCATGGTGAGAGATGTCACAAGTGGACCAACAATTTTCTGTTACGTGGTCTTTAGGAAAACTCCACTGAGTCCAATATCAACTCCTGATGTGTCTTCAAGAGATGATACAGCTGTGCCACAGGTTGCAAGATCGGAAAATAGTAATGGAAGAATGATGATAACCCTGCAGTTAAGGCCTATGGCAACAATTAGCTTAATTCAGATATCAGAGGGATCAACCTTTGATTTGATTTTGCCAGGAAAAATGAGGCAACTCAATCAACTTGAATCAGATGGTCCCGAGGACTTCACTATGAAACATGAGGCCTCTGAGTCTGACTTGGACCAACTAGAGGATCCAGCGGAATCATACATAAGAGACCTACTTGTTGCTTCTGGACTATACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTATGAAGAAGTGGAAGAATCTCGCAGGAAATGGGTCAAGAAAGATGATGAGAGCTGCATCAAGGATCACAATAAGAATAAACCAGGCCACAAAGTTTTGCTTGATCTGTTAAATGAGGCACTTTCAGTTGTTCTCGGACCTCCATTGACATTGTCCAGATTCAGAAAAAAACTAAGTAACTCTTCCATGTTGCTACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTATATATCCTCCATCTGACATATCTACTTATTCACTTGATGATTTGGTGGCTCAACACCTAGGATCCATCCCCTGGTCTGAATTAATAACCGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATATGTTCTAAGATGAAGTGA 2787 0.4112 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQHYCPQGELSVYSLSLFCVLVNNDLSDLSFENDPSMCNYQVEEEGRPENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKRMSENVGKKSSEKGLSRRGSVSWGSSNFNSSSQMDFESLYEDMDVDDNDDGWNKSFGEPRRRDHPQEEELQKFKKEFEAYQAARFQECSKVAEIDSVPKRLLAQENSNKEKVIHSDLVLQRAAAGKSADLDSHSFKTPPPESYGSEYRGDMMELVPATQRKTFPPRSRTLSRDFEESLMMKSCNRLDTSASPTRIVILKPGPESISNHEENWTISTGTIQGRNSIEDFLEEVKERLKCELQGKIVKKISVVRGSGIETPYNEKPSDPKLIARHIVKQVRESATRDADTNLLHSESTGSFKSEMQFNGATSPEVISRDTRKFLSDRLRNVVRSEARAGFPEGKSRSLALDSHKDGLQQGGDIMKYASNWEISKEDVEIQTGSFRHELDENIFLHRELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHLLTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFKYNIALRGRLFGRRVQSTVESRANEYGPMVRDVTSGPTIFCYVVFRKTPLSPISTPDVSSRDDTAVPQVARSENSNGRMMITLQLRPMATISLIQISEGSTFDLILPGKMRQLNQLESDGPEDFTMKHEASESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESRRKWVKKDDESCIKDHNKNKPGHKVLLDLLNEALSVVLGPPLTLSRFRKKLSNSSMLLPSGKELLNLVWDIIRVSIYPPSDISTYSLDDLVAQHLGSIPWSELITDEINILERDIECLITDDLVEELTKDICSKMK 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00890 928 Pfam Domain of unknown function (DUF4378) 751 918 IPR025486 -
Vian10g00890 928 Pfam DUF761-associated sequence motif 115 133 IPR032795 -
Vian10g00890 928 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 73 647 - -
Vian10g00890 928 MobiDBLite consensus disorder prediction 142 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00890 Vian-Chr10 8983454 8988074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00890 101 923 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.738 1.11e-114 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00890 - - gmx:100789616 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00890 10 8983454 8988074 Vian10g00890 10 8983454 8988074 ECH