Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00878 ATGGTTTCCCTTCACCTTGGTTTCCCACCTATTGACGAATCTTCTTACATTGAGAGAGCAGTGGTAGTGGAAAGCCTCCCACAATTCTTGGCAGACAAGCACCAACCTGCTTCACTTAATGCCTTTATTTGCAACAGACAAGAAGCTCAACTTCTCAAGGAATTGGTTTCTCATGGCTCTTGCCCTCATATTTTGCTCAAAGGACCCTCTGGTTCCGGGAAAAGAGAGCTAGCAATGGCTCTTCTTAGAGAAATATATGGTGATGCATGTTATTATCTGTCTCATGATTTAAGACACTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTCTCTGTACCCATAACATCCAGTCCTCATCACATGGAGCTAGATGTAAATTCAGAACCAAATGACAAATATGCTTTAATGGGATTAATCAAAGAAATAAGCAATATATATGCTATTGCCCCTGAAGTAAGCAATATTAATTTCAAGTCAGATTTTAAAGCACATTATCAAATGGGTAGCCGCTATTCTGATATATGCAAATTAGTACTCTGCTGTGAAGATGATGCAGACATCATTGAAGCTGTGAAAAATCGGTTCAAAACTGTACGAGTTGATGCTCCTCAAGCTCACCAAGTTGTTGAGGTTCTTATGCAGATAGCAAAGAATGAGAAATTTGATCTGTCCATGAACTTTGCTACGAAGATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTGGAAGCATGCAAAGCACACAAGAGCTTCCGACTGGAAACATTTACTTTAACATTCCTAGAAAATTGTCTCCATAGACTAAATAGGCTTACTCTCAATTCGAGGGAAATTTCAAATGCTTCTCTTGGATTTTGTCCAGCCGAAATTGATTCTCCTGGTAACGAATAA 903 0.3931 MVSLHLGFPPIDESSYIERAVVVESLPQFLADKHQPASLNAFICNRQEAQLLKELVSHGSCPHILLKGPSGSGKRELAMALLREIYGDACYYLSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNDKYALMGLIKEISNIYAIAPEVSNINFKSDFKAHYQMGSRYSDICKLVLCCEDDADIIEAVKNRFKTVRVDAPQAHQVVEVLMQIAKNEKFDLSMNFATKIATKSKQNLRKAIMALEACKAHKSFRLETFTLTFLENCLHRLNRLTLNSREISNASLGFCPAEIDSPGNE 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00878 300 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 31 252 - -
Vian10g00878 300 Gene3D - 205 263 - -
Vian10g00878 300 FunFam replication factor C subunit 3 204 257 - -
Vian10g00878 300 Gene3D - 28 167 IPR027417 -
Vian10g00878 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00878 Vian-Chr10 8887350 8889517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00878 29 252 Core DNA Replication Machinery Family AT5G27740 35.146 1.60e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00878 K10756 - gmx:100817775 414.075